Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I16
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0218 + 1433310-1435620,1435672-1435951,1436461-1436524,143...    29   3.9  
08_02_0368 - 16312961-16314588,16314794-16314890,16316360-163164...    29   5.1  
01_01_0847 - 6611378-6611554,6612181-6612366,6612547-6612658,661...    29   6.8  

>02_01_0218 +
           1433310-1435620,1435672-1435951,1436461-1436524,
           1436557-1436562
          Length = 886

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = +1

Query: 244 RRSGLKVRFRSRFDPANKTDHCDSRFHDGLESNHEVRGHPGVGL 375
           RRS + V +   F  AN T    SRFHD L   + V G P  GL
Sbjct: 163 RRSAVVVDWLRLFSNANATP-ARSRFHDTLVVGYAVAGDPQRGL 205


>08_02_0368 -
           16312961-16314588,16314794-16314890,16316360-16316489,
           16316605-16316657
          Length = 635

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 560 SNGDAFCTRMYSTSCKTALVNLLAQNAIVIGVLGRLGDV 676
           S+  A+C  M   +C  A V LL++  +++  LG  G+V
Sbjct: 512 SHVTAYCVFMSQLACTAADVELLSRRGVIVHGLGHHGEV 550


>01_01_0847 -
           6611378-6611554,6612181-6612366,6612547-6612658,
           6612748-6612784,6612866-6612905
          Length = 183

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -3

Query: 351 YFMIRFESIV-KARITMVSFISRIKARTKAYFQT-GTSYCFAAELGLVVVVSMYSGSENA 178
           Y MI F+  V +  + +++F +     +   F T G    F   +GLV  +SMYS    A
Sbjct: 65  YLMILFQKFVLRMVLPVLAFFALTAIFSSFLFHTHGLRKVFVGSIGLVASISMYSSPMVA 124

Query: 177 LLINWI 160
              N+I
Sbjct: 125 ASPNFI 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,570,763
Number of Sequences: 37544
Number of extensions: 412269
Number of successful extensions: 1072
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)