Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_I16
(911 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127661-1|AAI27662.1| 212|Homo sapiens TSPAN11 protein protein. 43 0.001
BC127660-1|AAI27661.1| 212|Homo sapiens TSPAN11 protein protein. 42 0.002
U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow... 35 0.36
M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow... 35 0.36
BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal d... 35 0.36
AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal d... 35 0.36
BC032802-1|AAH32802.1| 355|Homo sapiens tetraspanin 10 protein. 34 0.82
BC021923-1|AAH21923.1| 235|Homo sapiens TSPAN10 protein protein. 34 0.82
AK223186-1|BAD96906.1| 253|Homo sapiens CD151 antigen variant p... 34 0.82
AK096926-1|BAC04899.1| 225|Homo sapiens protein ( Homo sapiens ... 34 0.82
AF325213-1|AAG42857.1| 355|Homo sapiens oculospanin protein. 34 0.82
U14650-1|AAA87064.1| 253|Homo sapiens platelet-endothelial tetr... 33 1.1
D29963-1|BAA06229.1| 253|Homo sapiens CD151 protein. 33 1.1
DQ074789-1|AAY68211.1| 253|Homo sapiens CD151 antigen protein. 33 1.1
CR542098-1|CAG46895.1| 253|Homo sapiens CD151 protein. 33 1.1
CR456826-1|CAG33107.1| 253|Homo sapiens CD151 protein. 33 1.1
BT020132-1|AAV38934.1| 253|Homo sapiens CD151 antigen protein. 33 1.1
BT007397-1|AAP36061.1| 253|Homo sapiens CD151 antigen protein. 33 1.1
BC013302-1|AAH13302.1| 253|Homo sapiens CD151 molecule (Raph bl... 33 1.1
BC001374-1|AAH01374.1| 253|Homo sapiens CD151 molecule (Raph bl... 33 1.1
AF315942-1|AAK14179.1| 253|Homo sapiens hemidesmosomal tetraspa... 33 1.1
M96759-1|AAA60272.1| 351|Homo sapiens rod outer segment membran... 32 3.3
L07894-1|AAA60274.1| 351|Homo sapiens rod outer segment membran... 32 3.3
BC008100-1|AAH08100.1| 351|Homo sapiens retinal outer segment m... 32 3.3
CR457270-1|CAG33551.1| 518|Homo sapiens KBTBD4 protein. 31 5.8
BC002736-1|AAH02736.1| 518|Homo sapiens kelch repeat and BTB (P... 31 5.8
AK222550-1|BAD96270.1| 518|Homo sapiens kelch repeat and BTB (P... 31 5.8
AK001749-1|BAA91880.1| 518|Homo sapiens protein ( Homo sapiens ... 31 5.8
>BC127661-1|AAI27662.1| 212|Homo sapiens TSPAN11 protein protein.
Length = 212
Score = 43.2 bits (97), Expect = 0.001
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +2
Query: 389 EISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCC---- 556
+I+ +D LQ CCGSNS D+ +HST ++ +E +G V P SCC
Sbjct: 100 QITASVDRLQQDFKCCGSNSSADW-------QHSTYILLREAEGRQV----PDSCCKTVV 148
Query: 557 VSNGD-AFCTRMYST--SCKTALVNLLAQNAIVIGVLG 661
V G A + +Y C T L LA + +++G +G
Sbjct: 149 VRCGQRAHPSNIYKVEGGCLTKLEQFLADHLLLMGAVG 186
>BC127660-1|AAI27661.1| 212|Homo sapiens TSPAN11 protein protein.
Length = 212
Score = 42.3 bits (95), Expect = 0.002
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +2
Query: 389 EISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVS-- 562
+I+ +D LQ CCGSNS D+ +HST ++ +E +G V P SCC +
Sbjct: 100 QITASVDRLQQDFKCCGSNSSADW-------QHSTYILLREAEGRQV----PDSCCKTVV 148
Query: 563 ---NGDAFCTRMYST--SCKTALVNLLAQNAIVIGVLG 661
A + +Y C T L LA + +++G +G
Sbjct: 149 ARCGQRAHPSNIYKVEGGCLTKLEQFLADHLLLMGAVG 186
>U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVG--------MEFTEKHSTVVVSKEVDGDLVTLVIPSSCCV 559
ID LQ CCG+N + D+ ++F+ K + VDG + +P SCC
Sbjct: 156 IDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFSCCN 215
Query: 560 SNGDAFCTRMYSTS 601
+ C + T+
Sbjct: 216 PSSPRPCIQYQITN 229
>M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVG--------MEFTEKHSTVVVSKEVDGDLVTLVIPSSCCV 559
ID LQ CCG+N + D+ ++F+ K + VDG + +P SCC
Sbjct: 156 IDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFSCCN 215
Query: 560 SNGDAFCTRMYSTS 601
+ C + T+
Sbjct: 216 PSSPRPCIQYQITN 229
>BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVG--------MEFTEKHSTVVVSKEVDGDLVTLVIPSSCCV 559
ID LQ CCG+N + D+ ++F+ K + VDG + +P SCC
Sbjct: 156 IDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFSCCN 215
Query: 560 SNGDAFCTRMYSTS 601
+ C + T+
Sbjct: 216 PSSPRPCIQYQITN 229
>AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 35.1 bits (77), Expect = 0.36
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVG--------MEFTEKHSTVVVSKEVDGDLVTLVIPSSCCV 559
ID LQ CCG+N + D+ ++F+ K + VDG + +P SCC
Sbjct: 156 IDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDGVPFSCCN 215
Query: 560 SNGDAFCTRMYSTS 601
+ C + T+
Sbjct: 216 PSSPRPCIQYQITN 229
>BC032802-1|AAH32802.1| 355|Homo sapiens tetraspanin 10 protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.82
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDY 460
+ + Y +DP++ +D +Q L CCG+ SY D+
Sbjct: 188 VAIAHYQDDPDLRFLLDQVQLGLRCCGAASYQDW 221
>BC021923-1|AAH21923.1| 235|Homo sapiens TSPAN10 protein protein.
Length = 235
Score = 33.9 bits (74), Expect = 0.82
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDY 460
+ + Y +DP++ +D +Q L CCG+ SY D+
Sbjct: 188 VAIAHYQDDPDLRFLLDQVQLGLRCCGAASYQDW 221
>AK223186-1|BAD96906.1| 253|Homo sapiens CD151 antigen variant
protein.
Length = 253
Score = 33.9 bits (74), Expect = 0.82
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLSVIGAVG 227
>AK096926-1|BAC04899.1| 225|Homo sapiens protein ( Homo sapiens
cDNA FLJ39607 fis, clone SKNSH2006304, weakly similar to
Homo sapiens tetraspan NET-4 mRNA. ).
Length = 225
Score = 33.9 bits (74), Expect = 0.82
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDY 460
+ + Y +DP++ +D +Q L CCG+ SY D+
Sbjct: 188 VAIAHYQDDPDLRFLLDQVQLGLRCCGAASYQDW 221
>AF325213-1|AAG42857.1| 355|Homo sapiens oculospanin protein.
Length = 355
Score = 33.9 bits (74), Expect = 0.82
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDY 460
+ + Y +DP++ +D +Q L CCG+ SY D+
Sbjct: 188 VAIAHYQDDPDLRFLLDQVQLGLRCCGAASYQDW 221
>U14650-1|AAA87064.1| 253|Homo sapiens platelet-endothelial
tetraspan antigen 3 protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>D29963-1|BAA06229.1| 253|Homo sapiens CD151 protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>DQ074789-1|AAY68211.1| 253|Homo sapiens CD151 antigen protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>CR542098-1|CAG46895.1| 253|Homo sapiens CD151 protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>CR456826-1|CAG33107.1| 253|Homo sapiens CD151 protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>BT020132-1|AAV38934.1| 253|Homo sapiens CD151 antigen protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>BT007397-1|AAP36061.1| 253|Homo sapiens CD151 antigen protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>BC013302-1|AAH13302.1| 253|Homo sapiens CD151 molecule (Raph blood
group) protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>BC001374-1|AAH01374.1| 253|Homo sapiens CD151 molecule (Raph blood
group) protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>AF315942-1|AAK14179.1| 253|Homo sapiens hemidesmosomal tetraspanin
CD151 protein.
Length = 253
Score = 33.5 bits (73), Expect = 1.1
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCCVSNGD 571
++ +D LQ CCGSN+ D+ + S + S+E G V+P SCC
Sbjct: 142 VTSAVDQLQQEFHCCGSNNSQDW-------RDSEWIRSQEAGG----RVVPDSCC-KTVV 189
Query: 572 AFC------TRMYST--SCKTALVNLLAQNAIVIGVLG 661
A C + +Y C T L + ++ VIG +G
Sbjct: 190 ALCGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVG 227
>M96759-1|AAA60272.1| 351|Homo sapiens rod outer segment membrane
protein 1 protein.
Length = 351
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVGMEFT--------EKHSTVVVSKEVDGDLVTLVIPSSCC 556
+D LQ CCG + Y D+ G+++ ++ + V+G +T +P SCC
Sbjct: 159 VDELQLRYHCCGRHGYKDWFGVQWVSSRYLDPGDRDVADRIQSNVEGLYLTDGVPFSCC 217
>L07894-1|AAA60274.1| 351|Homo sapiens rod outer segment membrane
protein 1 protein.
Length = 351
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVGMEFT--------EKHSTVVVSKEVDGDLVTLVIPSSCC 556
+D LQ CCG + Y D+ G+++ ++ + V+G +T +P SCC
Sbjct: 159 VDELQLRYHCCGRHGYKDWFGVQWVSSRYLDPGDRDVADRIQSNVEGLYLTDGVPFSCC 217
>BC008100-1|AAH08100.1| 351|Homo sapiens retinal outer segment
membrane protein 1 protein.
Length = 351
Score = 31.9 bits (69), Expect = 3.3
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +2
Query: 404 IDSLQTSLGCCGSNSYMDYVGMEFT--------EKHSTVVVSKEVDGDLVTLVIPSSCC 556
+D LQ CCG + Y D+ G+++ ++ + V+G +T +P SCC
Sbjct: 159 VDELQLRYHCCGRHGYKDWFGVQWVSSRYLDPGDRDVADRIQSNVEGLYLTDGVPFSCC 217
>CR457270-1|CAG33551.1| 518|Homo sapiens KBTBD4 protein.
Length = 518
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLV 538
I W N E +SL+TSL G N ++ +G E + HS V + D +++
Sbjct: 209 IEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVS 268
Query: 539 IPSSCC 556
+S C
Sbjct: 269 GQNSLC 274
>BC002736-1|AAH02736.1| 518|Homo sapiens kelch repeat and BTB (POZ)
domain containing 4 protein.
Length = 518
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLV 538
I W N E +SL+TSL G N ++ +G E + HS V + D +++
Sbjct: 209 IEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVS 268
Query: 539 IPSSCC 556
+S C
Sbjct: 269 GQNSLC 274
>AK222550-1|BAD96270.1| 518|Homo sapiens kelch repeat and BTB (POZ)
domain containing 4 variant protein.
Length = 518
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLV 538
I W N E +SL+TSL G N ++ +G E + HS V + D +++
Sbjct: 209 IEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVS 268
Query: 539 IPSSCC 556
+S C
Sbjct: 269 GQNSLC 274
>AK001749-1|BAA91880.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ10887 fis, clone NT2RP4002018, weakly similar to
RING CANAL PROTEIN. ).
Length = 518
Score = 31.1 bits (67), Expect = 5.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 359 IPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLV 538
I W N E +SL+TSL G N ++ +G E + HS V + D +++
Sbjct: 209 IEAWINFNKEEREAFAESLRTSLKEIGENVHIYLIGKESSRTHSLAVSLHCAEDDSISVS 268
Query: 539 IPSSCC 556
+S C
Sbjct: 269 GQNSLC 274
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,089,026
Number of Sequences: 237096
Number of extensions: 2182625
Number of successful extensions: 7918
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 7768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7911
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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