Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_I16
(911 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 36 0.053
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 32 0.65
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 32 0.65
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 32 0.65
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical ... 30 2.0
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF078790-4|AAC26932.1| 311|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006681-3|AAK85494.1| 311|Caenorhabditis elegans Hypothetical ... 29 3.5
Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical p... 28 8.1
Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical p... 28 8.1
Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +2
Query: 335 NLIMKYVDIPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEV 514
N I ++ V Y +DP++ IDS+Q + CCG N D+ + + V S E
Sbjct: 144 NYIRNLLNDVVVGYRDDPDLQLLIDSMQETWMCCGINGADDWDRNTYFSIEAREVASPEA 203
Query: 515 DGDLVTLVIPSSCCVSN 565
G +P SCC+++
Sbjct: 204 GG------VPFSCCINS 214
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 35.5 bits (78), Expect = 0.053
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = +2
Query: 371 DYVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSS 550
+Y DP I+ ++ LQ CCGSN++ D+ E E H V IP S
Sbjct: 139 NYNLDPNIAKAVNYLQRDSKCCGSNAFNDWPKPE-VEDHYLPYAKTVVQR---VQYIPDS 194
Query: 551 CCVS 562
CC S
Sbjct: 195 CCKS 198
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.28
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 19/117 (16%)
Frame = +2
Query: 341 IMKYVDIPVWD-----YVNDPEISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVS 505
I YV+ ++D Y ++ D D++Q CCG +Y D++ + + ST +
Sbjct: 114 IKHYVESSMYDTIRNRYSSETAFKDAFDTVQEKFECCGVKTYTDWLSARWDAEPSTQLEV 173
Query: 506 KEVDGDLVTLVI--------------PSSCCVSNGDAFCTRMYSTSCKTALVNLLAQ 634
E D + I PSSCC +G S A +N AQ
Sbjct: 174 NEEDAGRIEHGIGAFGGNKGTGYGRVPSSCCNEHGKLSYPNNCGRSFSQAPLNTYAQ 230
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 350 YVDIPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYV 463
Y D V +Y N+ + +D + TSL CCG+N D++
Sbjct: 119 YRDELVANYHNNSRTKNTLDWVHTSLKCCGANGCEDFL 156
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 31.9 bits (69), Expect = 0.65
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 392 ISDEIDSLQTSLGCCGSNSYMDYVGMEFTEKHSTVVVSKEVDGDLVTLVIPSSCC 556
+++ ID LQ CCGS DY+ +++ ST S+E++ L P SCC
Sbjct: 111 VTEFIDKLQFYEKCCGSLGPTDYISSRWSQ--STNQDSEEIESPL----FPVSCC 159
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.65
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 350 YVDIPVWDYVNDPEISDEIDSLQTSLGCCGSNSYMDYV 463
Y D V +Y N+ + +D + TSL CCG+N D++
Sbjct: 130 YRDELVANYHNNSRTKNTLDWVHTSLKCCGANGCEDFL 167
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -3
Query: 852 CYTNFIVSDVNVLSFADSSAARAIIIVLEFSKPSAPSRFSF----YECNVP 712
C+ N+ + V ++S + A RAII VL + S PS F+F Y+ N P
Sbjct: 608 CFQNYCDNSV-IVSRKGNDARRAIIEVLSRDEASNPSNFTFLNAKYQSNCP 657
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -3
Query: 852 CYTNFIVSDVNVLSFADSSAARAIIIVLEFSKPSAPSRFSF----YECNVP 712
C+ N+ + V ++S + A RAII VL + S PS F+F Y+ N P
Sbjct: 613 CFQNYCDNSV-IVSRKGNDARRAIIEVLSRDEASNPSNFTFLNAKYQSNCP 662
>AL032639-4|CAA21636.2| 858|Caenorhabditis elegans Hypothetical
protein Y38F1A.3 protein.
Length = 858
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 580 HEDVLDQLQNCIGQFIGAKCNRDRCTWASR*CLFSYWASYSLYFWHV 720
H+D L + +C+ +F+ + D +W+ R L W + + H+
Sbjct: 578 HQDCLSEKPSCLQKFVFSTGFHDAVSWSDRLALLENWREMASEYQHL 624
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.9 bits (64), Expect = 2.6
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = -3
Query: 801 SSAARAIIIVLEFSKPSAPSRFSFYECNVPKVERIRCPVTE*-TSPRRPSTPITIAFCAN 625
S+ ++ IIV K S+ +R + P ++I P T TS P+TP A
Sbjct: 462 SATSKVAIIV---GKDSSFARARLFTTKHPSTQKIDVPTTTVQTSTTVPTTPSKTT--AT 516
Query: 624 KLTNAVLQLVEYILVQKASPLLT-QQLLGITNVTRSPSTSLDTTTVECFSVNSIP 463
T E ++ +T Q+ +T+ T PST+ TTT S + P
Sbjct: 517 TTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTKTTTSTPTSP 571
>AF078790-4|AAC26932.1| 311|Caenorhabditis elegans Hypothetical
protein F36H12.8 protein.
Length = 311
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 341 IMKYVDIPVWDYVNDPEISDEIDSLQTSLGCCGSNSY 451
IMK VD WDY DP +D ++ +L CG Y
Sbjct: 262 IMKMVDS--WDYFADPNYADCYRLMKQTLANCGKPEY 296
>AC006681-3|AAK85494.1| 311|Caenorhabditis elegans Hypothetical
protein R13H9.5 protein.
Length = 311
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 341 IMKYVDIPVWDYVNDPEISDEIDSLQTSLGCCGSNSY 451
IMK VD WDY DP +D ++ +L CG Y
Sbjct: 262 IMKMVDS--WDYFADPNYADCYRLMKQALANCGKPEY 296
>Z74030-16|CAI79165.1| 481|Caenorhabditis elegans Hypothetical
protein D1054.9e protein.
Length = 481
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 690 PVTE*TSPRRPSTPITIAFCANKLTNAVLQLVEYILVQKASPLLTQQLLGITNVTRSPST 511
PVT T P PST ++ + + T L ++E + +T+ T T PST
Sbjct: 229 PVTSTTIPTEPSTSVSSS-STSASTTPELPIIE----ETEEREVTEASTSTTTTTAEPST 283
Query: 510 SLDTTT 493
+ TTT
Sbjct: 284 TATTTT 289
>Z74030-15|CAI79164.1| 477|Caenorhabditis elegans Hypothetical
protein D1054.9d protein.
Length = 477
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 690 PVTE*TSPRRPSTPITIAFCANKLTNAVLQLVEYILVQKASPLLTQQLLGITNVTRSPST 511
PVT T P PST ++ + + T L ++E + +T+ T T PST
Sbjct: 229 PVTSTTIPTEPSTSVSSS-STSASTTPELPIIE----ETEEREVTEASTSTTTTTAEPST 283
Query: 510 SLDTTT 493
+ TTT
Sbjct: 284 TATTTT 289
>Z74030-7|CAA98447.2| 559|Caenorhabditis elegans Hypothetical
protein D1054.9b protein.
Length = 559
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 690 PVTE*TSPRRPSTPITIAFCANKLTNAVLQLVEYILVQKASPLLTQQLLGITNVTRSPST 511
PVT T P PST ++ + + T L ++E + +T+ T T PST
Sbjct: 229 PVTSTTIPTEPSTSVSSS-STSASTTPELPIIE----ETEEREVTEASTSTTTTTAEPST 283
Query: 510 SLDTTT 493
+ TTT
Sbjct: 284 TATTTT 289
>Z74030-6|CAA98444.2| 508|Caenorhabditis elegans Hypothetical
protein D1054.9a protein.
Length = 508
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = -3
Query: 690 PVTE*TSPRRPSTPITIAFCANKLTNAVLQLVEYILVQKASPLLTQQLLGITNVTRSPST 511
PVT T P PST ++ + + T L ++E + +T+ T T PST
Sbjct: 229 PVTSTTIPTEPSTSVSSS-STSASTTPELPIIE----ETEEREVTEASTSTTTTTAEPST 283
Query: 510 SLDTTT 493
+ TTT
Sbjct: 284 TATTTT 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,620,077
Number of Sequences: 27780
Number of extensions: 354417
Number of successful extensions: 1051
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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