Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I14
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492763-1|AAM11672.1|  415|Drosophila melanogaster polyprotein ...    33   0.41 
AY058723-1|AAL13952.1|  858|Drosophila melanogaster LD46494p pro...    31   1.6  
AE014134-751|AAF51002.1|  858|Drosophila melanogaster CG17840-PA...    31   1.6  

>AF492763-1|AAM11672.1|  415|Drosophila melanogaster polyprotein
           protein.
          Length = 415

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = -3

Query: 176 INLNKLISNPIQHPNHEFEEIEINVLKNRINKNNILFELLFVKINLKDSL 27
           ++ + +  NPI H   +  ++  + +++++NKN I+ E +  + N+ D L
Sbjct: 348 LSASSIAKNPINHKRTKHIDVRYHFIRDKVNKNEIIVEYVNTQNNVADIL 397


>AY058723-1|AAL13952.1|  858|Drosophila melanogaster LD46494p
           protein.
          Length = 858

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 635 KFSLIIIEKXIHPRLLIEENANNFRN 558
           +F L+ I++  H RL IEENAN F +
Sbjct: 40  RFRLLTIDRLAHNRLSIEENANEFNS 65


>AE014134-751|AAF51002.1|  858|Drosophila melanogaster CG17840-PA
           protein.
          Length = 858

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 635 KFSLIIIEKXIHPRLLIEENANNFRN 558
           +F L+ I++  H RL IEENAN F +
Sbjct: 40  RFRLLTIDRLAHNRLSIEENANEFNS 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,289,279
Number of Sequences: 53049
Number of extensions: 176413
Number of successful extensions: 284
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)