Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I12
         (927 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    25   3.3  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   4.3  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    24   7.5  
AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   9.9  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   9.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.9  

>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 144 ITTAVGVKIIVKLFRFYSLKVFQDV*DHTVTNGL 245
           ++  +G++ I K    + LKV +D  D+ V NG+
Sbjct: 232 LSRLLGIRFIDKEVSAFFLKVVRDTIDYRVKNGI 265


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -3

Query: 586 HLAKGPRTKGFFDSSLSLVRLLRGYRNGESTFKISSKSV 470
           HL+  P  +   D +L +VR LRG     S  ++S + +
Sbjct: 750 HLSWRPHVEMVADKALRVVRALRGIMRNHSGPQVSKRKL 788


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 221 RPYRYKRFSDVPEGIINKLRQRAFHKYPDLEFYWDP 328
           +PY+    + +PEG+   L   AFH  PD  ++ DP
Sbjct: 379 QPYQLPNGAILPEGVGVILPNLAFHYDPD--YFPDP 412


>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -3

Query: 448 LSKLLSG*VNFIYFNY-FCKYI-FRINSSNFFRT 353
           +++L +  +  ++F +   K+I F +NS NF+RT
Sbjct: 69  VNELTANTITTLFFTHSVTKFIYFAVNSENFYRT 102


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -3

Query: 448 LSKLLSG*VNFIYFNY-FCKYI-FRINSSNFFRT 353
           +++L +  +  ++F +   K+I F +NS NF+RT
Sbjct: 69  VNELTANTITTLFFTHSVTKFIYFAVNSENFYRT 102


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 14  RSHYREFLKICR 49
           R HY EF K+CR
Sbjct: 214 REHYIEFQKVCR 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,522
Number of Sequences: 2352
Number of extensions: 12561
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)