Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I07
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.71 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.94 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   6.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   8.8  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 823 IRYDNTHLHLRQYLNIKAIIDLQYMHQHDSFSNIENNL 710
           I Y N  +  R+Y  I A+I+ +Y ++  +     NNL
Sbjct: 246 IDYGNEAISKREYNGIGAVIEFKYSYEISNAFRGNNNL 283


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 481 CVNSQTGL-VDNRQVPILARWQRDYT 555
           C  S+T L   NR++P  A W++D T
Sbjct: 378 CFKSRTNLDPSNRKLPAPANWKKDTT 403


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +1

Query: 370 PPRTPYENRMYSLK---IECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPILAR 537
           PP+ P   ++ S     IE GT  PD+P ++   S     C + ++   +   +P+L R
Sbjct: 565 PPQCPRFRKLDSPSDSGIESGTEKPDKPASSSASSAPTSVCSSPRSEDKEVEDMPVLKR 623


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 844 IDNNGTRIRYDNTHLHLRQYLNIKAI 767
           I NN  +  Y+N + + + Y NI  I
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 844 IDNNGTRIRYDNTHLHLRQYLNIKAI 767
           I NN  +  Y+N + + + Y NI  I
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 844 IDNNGTRIRYDNTHLHLRQYLNIKAI 767
           I NN  +  Y+N + + + Y NI  I
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 844 IDNNGTRIRYDNTHLHLRQYLNIKAI 767
           I NN  +  Y+N + + + Y NI  I
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 243 WHHNA**RIRHDHSITGLENCKNLD*FSQALLHRRYL 133
           W ++A     ++   + L NCKN D  +  L  +RYL
Sbjct: 15  WQNSASLENDNEFGFSYLLNCKNYDHPTTLLKLKRYL 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,151
Number of Sequences: 438
Number of extensions: 5279
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)