Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_I06
(799 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094861-1|AAM11214.1| 362|Drosophila melanogaster RE22192p pro... 30 3.2
AF184225-1|AAD55736.1| 377|Drosophila melanogaster BcDNA.GH0604... 30 3.2
AE014297-3653|AAF56353.1| 362|Drosophila melanogaster CG7016-PA... 30 3.2
AE013599-4026|AAF47319.2| 377|Drosophila melanogaster CG2668-PA... 30 3.2
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 30 4.2
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 30 4.2
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 30 4.2
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 30 4.2
AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-P... 30 4.2
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 30 4.2
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 30 4.2
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 29 7.4
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 7.4
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 7.4
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 7.4
>AY094861-1|AAM11214.1| 362|Drosophila melanogaster RE22192p
protein.
Length = 362
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 772 PXPPXXXXKKXGGGXKKXGXXXGGPPPXXXXXPPGGXXPPXGG 644
P PP G G GGPPP GG PP G
Sbjct: 176 PPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRPG 218
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 766 PPXXXXKKXGGGXKKXGXXXGGPPPXXXXXPPGGXXPPXGG 644
PP G + G GGPPP GG PP G
Sbjct: 166 PPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPG 206
>AF184225-1|AAD55736.1| 377|Drosophila melanogaster BcDNA.GH06048
protein.
Length = 377
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 736 GGXKKXGXXXGGPPPXXXXXPPGGXXPPXGGPL 638
GG G GGP P PGG P GGPL
Sbjct: 199 GGPSPGGPSPGGPSPGGPF--PGGSPPSPGGPL 229
>AE014297-3653|AAF56353.1| 362|Drosophila melanogaster CG7016-PA
protein.
Length = 362
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 772 PXPPXXXXKKXGGGXKKXGXXXGGPPPXXXXXPPGGXXPPXGG 644
P PP G G GGPPP GG PP G
Sbjct: 176 PPPPRPGWNGGGPPPPMPGWNGGGPPPPRPGWNGGGPPPPRPG 218
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 766 PPXXXXKKXGGGXKKXGXXXGGPPPXXXXXPPGGXXPPXGG 644
PP G + G GGPPP GG PP G
Sbjct: 166 PPRPGFNGGGPPPPRPGWNGGGPPPPMPGWNGGGPPPPRPG 206
>AE013599-4026|AAF47319.2| 377|Drosophila melanogaster CG2668-PA
protein.
Length = 377
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 736 GGXKKXGXXXGGPPPXXXXXPPGGXXPPXGGPL 638
GG G GGP P PGG P GGPL
Sbjct: 199 GGPSPGGPSPGGPSPGGPF--PGGSPPSPGGPL 229
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 510 GPGQGGGPPGGGGGGGGGGGPP 531
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 499 GPGQGGGPPGGGGGGGGGGGPP 520
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 505 GPGQGGGPPGGGGGGGGGGGPP 526
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 510 GPGQGGGPPGGGGGGGGGGGPP 531
>AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-PB,
isoform B protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 489 GPGQGGGPPGGGGGGGGGGGPP 510
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 510 GPGQGGGPPGGGGGGGGGGGPP 531
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 642 GPPXGGXXPPGGXXXXXGGGPP 707
GP GG P GG GGGPP
Sbjct: 510 GPGQGGGPPGGGGGGGGGGGPP 531
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 597 GGVFXPPXXXXXKKRGPPXGGXXPPGGXXXXXGGG 701
G F P ++RG P GG PG GGG
Sbjct: 3173 GQFFLPSRVVLPEQRGTPSGGGGAPGAGGPGSGGG 3207
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 597 GGVFXPPXXXXXKKRGPPXGGXXPPGGXXXXXGGG 701
G F P ++RG P GG PG GGG
Sbjct: 3308 GQFFLPSRVVLPEQRGTPSGGGGAPGAGGPGSGGG 3342
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 597 GGVFXPPXXXXXKKRGPPXGGXXPPGGXXXXXGGG 701
G F P ++RG P GG PG GGG
Sbjct: 3308 GQFFLPSRVVLPEQRGTPSGGGGAPGAGGPGSGGG 3342
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 597 GGVFXPPXXXXXKKRGPPXGGXXPPGGXXXXXGGG 701
G F P ++RG P GG PG GGG
Sbjct: 3308 GQFFLPSRVVLPEQRGTPSGGGGAPGAGGPGSGGG 3342
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,196,994
Number of Sequences: 53049
Number of extensions: 692245
Number of successful extensions: 2359
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -