Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I03
         (927 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    24   1.7  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    24   1.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    24   1.7  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    24   1.7  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    24   1.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   5.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   9.1  

>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 350 SNRNNEMIHKQNRNYQDLQ 294
           S+ +N+ IH  N NY+ LQ
Sbjct: 83  SSLSNKTIHNNNNNYKKLQ 101


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 350 SNRNNEMIHKQNRNYQDLQ 294
           S+ +N+ IH  N NY+ LQ
Sbjct: 83  SSLSNKTIHNNNNNYKKLQ 101


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 350 SNRNNEMIHKQNRNYQDLQ 294
           S+ +N+ IH  N NY+ LQ
Sbjct: 83  SSLSNKTIHNNNNNYKKLQ 101


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 350 SNRNNEMIHKQNRNYQDLQ 294
           S+ +N+ IH  N NY+ LQ
Sbjct: 83  SSLSNKTIHNNNNNYKKLQ 101


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 350 SNRNNEMIHKQNRNYQDLQ 294
           S+ +N+ IH  N NY+ LQ
Sbjct: 316 SSLSNKTIHNNNNNYKKLQ 334


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +2

Query: 296 EDLDSFDFVYESFHCYDC 349
           +  + +++VY+ + C DC
Sbjct: 561 DQCEEYEYVYDEYTCMDC 578


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 743  KPPXPPPRN 717
            +PP PPPRN
Sbjct: 1858 EPPPPPPRN 1866


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 223 FYCKNNCSSPVVESHF 176
           F C N+C +P+V   F
Sbjct: 304 FACTNSCMNPIVYGAF 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,926
Number of Sequences: 438
Number of extensions: 2771
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)