Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I02
         (828 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella ve...    35   2.2  
UniRef50_Q6ML35 Cluster: Putative uncharacterized protein; n=1; ...    34   5.0  
UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep: ...    34   5.0  
UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2; ...    33   6.6  
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    33   6.6  
UniRef50_UPI0000E4931A Cluster: PREDICTED: hypothetical protein;...    29   7.0  
UniRef50_Q9A2R2 Cluster: OmpA family protein; n=5; Caulobacter|R...    33   8.7  
UniRef50_Q0ANI5 Cluster: OmpA/MotB domain protein precursor; n=2...    33   8.7  
UniRef50_Q19479 Cluster: Putative uncharacterized protein inft-2...    26   9.0  

>UniRef50_A7SLQ1 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1027

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = -3

Query: 730 PPPXPXXXXKXXPYPXXXXXXRXPPPPPPXXXXXXXXXXXXXXXGRXNXKKKXPPPXXGG 551
           PPP P       P P        PPPPPP                        PPP  GG
Sbjct: 419 PPPPPGGVPPPPPPPPPGMGGAPPPPPPPPPGMGGGPPPPPPPPPGPGGGPPPPPPPPGG 478

Query: 550 G 548
           G
Sbjct: 479 G 479


>UniRef50_Q6ML35 Cluster: Putative uncharacterized protein; n=1;
           Bdellovibrio bacteriovorus|Rep: Putative uncharacterized
           protein - Bdellovibrio bacteriovorus
          Length = 265

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -1

Query: 693 PTPXXXXXXGX-PPPPPPXXXXXFFFFXGXGGGGXXTKKKXTPPPXXGGG 547
           P P      G  PPPPPP     F    G G GG        PPP   GG
Sbjct: 213 PAPNMPEDYGDIPPPPPPPPPPPFGDDFGGGFGGDSDFPPPPPPPPFEGG 262



 Score = 33.9 bits (74), Expect = 5.0
 Identities = 16/38 (42%), Positives = 16/38 (42%)
 Frame = -1

Query: 660 PPPPPPXXXXXFFFFXGXGGGGXXTKKKXTPPPXXGGG 547
           PPPPPP        F G  GG         PPP  GGG
Sbjct: 226 PPPPPPPPPPFGDDFGGGFGGDSDFPPPPPPPPFEGGG 263


>UniRef50_A5JUU8 Cluster: Formin B; n=2; Trypanosoma brucei|Rep:
           Formin B - Trypanosoma brucei TREU927
          Length = 1004

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -3

Query: 730 PPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           PPP P    K  P P      + PPPPPP
Sbjct: 488 PPPPPPPGGKLPPPPPPPPGGKLPPPPPP 516


>UniRef50_A4TTL3 Cluster: Putative uncharacterized protein; n=2;
           cellular organisms|Rep: Putative uncharacterized protein
           - Magnetospirillum gryphiswaldense
          Length = 374

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 19/48 (39%), Positives = 20/48 (41%)
 Frame = -1

Query: 666 GXPPPPPPXXXXXFFFFXGXGGGGXXTKKKXTPPPXXGGGXXXYIKKK 523
           G  PPPPP     FFFF               PPP  GGG   + KKK
Sbjct: 43  GGAPPPPPARRQKFFFFPHF---------FFPPPPRRGGGGVFFYKKK 81


>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 17/60 (28%), Positives = 17/60 (28%)
 Frame = -3

Query: 730  PPPXPXXXXKXXPYPXXXXXXRXPPPPPPXXXXXXXXXXXXXXXGRXNXKKKXPPPXXGG 551
            PPP P       P P        PPPPPP                        PPP  GG
Sbjct: 1013 PPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPPMHGGAPPPPPPPMFGG 1072


>UniRef50_UPI0000E4931A Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 898

 Score = 29.5 bits (63), Expect(2) = 7.0
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 660 PPPPPPXXXXXFFFFXGXGGGG 595
           PPPPPP     F    G GGGG
Sbjct: 541 PPPPPPPAVNKFTGGGGGGGGG 562



 Score = 22.6 bits (46), Expect(2) = 7.0
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -1

Query: 693 PTPXXXXXXGXPPPPPP 643
           P P        PPPPPP
Sbjct: 494 PAPPPAVASFAPPPPPP 510


>UniRef50_Q9A2R2 Cluster: OmpA family protein; n=5; Caulobacter|Rep:
           OmpA family protein - Caulobacter crescentus
           (Caulobacter vibrioides)
          Length = 449

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 745 YIFFXPPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           Y F  PPP P       P P        PPPPPP
Sbjct: 301 YSFASPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 334


>UniRef50_Q0ANI5 Cluster: OmpA/MotB domain protein precursor; n=2;
           Hyphomonadaceae|Rep: OmpA/MotB domain protein precursor
           - Maricaulis maris (strain MCS10)
          Length = 359

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/34 (41%), Positives = 14/34 (41%)
 Frame = -3

Query: 745 YIFFXPPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           Y F  PPP P       P P        PPPPPP
Sbjct: 211 YSFAAPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 244


>UniRef50_Q19479 Cluster: Putative uncharacterized protein inft-2;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein inft-2 - Caenorhabditis elegans
          Length = 1140

 Score = 25.8 bits (54), Expect(2) = 9.0
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 693 PTPXXXXXXGXPPPPPP 643
           P P      G PPPPPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556



 Score = 25.8 bits (54), Expect(2) = 9.0
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 666 GXPPPPPPXXXXXFFF 619
           G PPPPPP     F F
Sbjct: 574 GGPPPPPPPPPPSFMF 589


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,767,910
Number of Sequences: 1657284
Number of extensions: 7345964
Number of successful extensions: 61996
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48037
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)