Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_I02
         (828 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          31   5.1  
Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.        26   6.4  
L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1...    26   6.4  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    31   6.7  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    31   6.7  
AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.  ...    31   6.7  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    31   6.7  
BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger ...    26   6.9  

>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
 Frame = -3

Query: 730 PPPXPXXXXKXXPYPXXXXXXRXPPP-PPPXXXXXXXXXXXXXXXGRXNXKKKXPPPXXG 554
           PPP P       P P        PPP PPP                +   K + P P  G
Sbjct: 74  PPPPPPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPPRKDQQPGPAGG 133

Query: 553 GG 548
           GG
Sbjct: 134 GG 135


>Y08765-1|CAA70018.1|  639|Homo sapiens SF1-Hl1 isoform protein.
          Length = 639

 Score = 26.2 bits (55), Expect(2) = 6.4
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -1

Query: 660 PPPPPPXXXXXFFFFXGXGGGGXXTKKKXTPPP 562
           PPPPPP     F    G G  G         PP
Sbjct: 601 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 633



 Score = 23.0 bits (47), Expect(2) = 6.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 666 GXPPPPPP 643
           G PPPPPP
Sbjct: 580 GAPPPPPP 587


>L49380-1|AAB04033.1|  639|Homo sapiens transcription factor ZFM1
           protein.
          Length = 639

 Score = 26.2 bits (55), Expect(2) = 6.4
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -1

Query: 660 PPPPPPXXXXXFFFFXGXGGGGXXTKKKXTPPP 562
           PPPPPP     F    G G  G         PP
Sbjct: 601 PPPPPPMDPSNFVTMMGMGVAGIPPFGMPPAPP 633



 Score = 23.0 bits (47), Expect(2) = 6.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 666 GXPPPPPP 643
           G PPPPPP
Sbjct: 580 GAPPPPPP 587


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -3

Query: 730 PPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           PPP P       P P        PPPPPP
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -3

Query: 730 PPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           PPP P       P P        PPPPPP
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328


>AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.
           ).).
          Length = 232

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 739 FFXPPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           +F PPP P         P        PPPPPP
Sbjct: 138 YFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPP 169


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -3

Query: 730 PPPXPXXXXKXXPYPXXXXXXRXPPPPPP 644
           PPP P       P P        PPPPPP
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPPPP 328


>BC000773-1|AAH00773.1|  265|Homo sapiens Similar to zinc finger
           protein 162 protein.
          Length = 265

 Score = 26.2 bits (55), Expect(2) = 6.9
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -1

Query: 660 PPPPPPXXXXXFFFFXGXGGGGXXTKKKXTPPP 562
           PPPPPP     F    G G  G         PP
Sbjct: 227 PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPP 259



 Score = 23.0 bits (47), Expect(2) = 6.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 666 GXPPPPPP 643
           G PPPPPP
Sbjct: 206 GAPPPPPP 213


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,414,515
Number of Sequences: 237096
Number of extensions: 1582111
Number of successful extensions: 13557
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10147
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)