Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H23
         (969 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    31   1.2  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical pr...    30   2.2  
AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical ...    29   6.6  
AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical ...    29   6.6  
AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical ...    29   6.6  

>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
            protein ZK1251.9 protein.
          Length = 1701

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 426  NDEHFAEVTREDQNGDADSQENGDSDSDTXI 518
            NDE   E  RED + D DS E+GD D D  I
Sbjct: 1394 NDEEEDE-QREDHDEDEDSDESGDGDDDEEI 1423


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
            ZK1251.9 protein.
          Length = 1701

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +3

Query: 426  NDEHFAEVTREDQNGDADSQENGDSDSDTXI 518
            NDE   E  RED + D DS E+GD D D  I
Sbjct: 1394 NDEEEDE-QREDHDEDEDSDESGDGDDDEEI 1423


>U00065-9|AAA50738.2| 1009|Caenorhabditis elegans Hypothetical
           protein D1044.6 protein.
          Length = 1009

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/25 (48%), Positives = 20/25 (80%)
 Frame = +1

Query: 331 RKLKKYKNRPTSSVVLTKKIKMKRK 405
           RK++K K RPT+  V+ KK++M++K
Sbjct: 309 RKIEKEKPRPTTENVVLKKVEMEKK 333


>AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical
           protein H06I04.3b protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 432 EHFAEVTREDQNGDADSQENGDSDSD 509
           +  AE+T++ Q  D D  E+GDSD +
Sbjct: 419 KELAEITKDTQAPDFDMMEDGDSDEE 444


>AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical
           protein H06I04.3c protein.
          Length = 786

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 432 EHFAEVTREDQNGDADSQENGDSDSD 509
           +  AE+T++ Q  D D  E+GDSD +
Sbjct: 419 KELAEITKDTQAPDFDMMEDGDSDEE 444


>AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical
           protein H06I04.3a protein.
          Length = 833

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 432 EHFAEVTREDQNGDADSQENGDSDSD 509
           +  AE+T++ Q  D D  E+GDSD +
Sbjct: 419 KELAEITKDTQAPDFDMMEDGDSDEE 444


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,326,602
Number of Sequences: 27780
Number of extensions: 198842
Number of successful extensions: 664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)