Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H22
         (919 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.8  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   7.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 184 SLXPVLSAQLITAPTGRPRE--IRNFAPAEP 98
           SL PV+ + ++TAP  RP +     FAP EP
Sbjct: 89  SLAPVVPSSVVTAPPARPSQPPTTRFAP-EP 118


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -1

Query: 253 PGTGRRQSVQATFDNLGQ-RSHTDSLXPVLSAQ 158
           PGTG R S+Q   D + Q RS +    PV   Q
Sbjct: 24  PGTGDRASIQRLEDEMVQERSFSQRALPVPRTQ 56


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 17/66 (25%), Positives = 27/66 (40%)
 Frame = -1

Query: 286  FTLFDCGHNHVPGTGRRQSVQATFDNLGQRSHTDSLXPVLSAQLITAPTGRPREIRNFAP 107
            F  + C  ++V    R Q    T+D +  R H       +S+     P  +P +    +P
Sbjct: 919  FNAWSCECDYVT---RFQEYLKTYDFVRDR-HKIRCASYVSSNATVVPATQPADASQASP 974

Query: 106  AEPPRP 89
            AE P P
Sbjct: 975  AEEPLP 980


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,536
Number of Sequences: 2352
Number of extensions: 15009
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)