Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_H22
(919 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 180 3e-45
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 165 7e-41
AY058367-1|AAL13596.1| 378|Drosophila melanogaster GH13802p pro... 30 3.9
AE014298-3055|AAF50879.1| 378|Drosophila melanogaster CG1314-PA... 30 3.9
U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein. 29 6.8
BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p pro... 29 6.8
BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p pro... 29 6.8
AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB... 29 6.8
AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA... 29 6.8
Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger... 29 8.9
BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p pro... 29 8.9
AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB... 29 8.9
AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA... 29 8.9
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 180 bits (437), Expect = 3e-45
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +2
Query: 212 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 391
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 392 IVNNKGEMKGSAITGPVAKECADLWPR 472
IVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 69.7 bits (163), Expect = 5e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 78 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGXK 182
MSKRGRGG+AG KFRISLGLPVGAV+NCADNTG K
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAK 35
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 165 bits (401), Expect = 7e-41
Identities = 78/87 (89%), Positives = 79/87 (90%)
Frame = +2
Query: 212 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 391
I+GRLNRLPAAG GDM VATVKKGKPELRKKV RQRKPFRRRDGVFIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAGV 104
Query: 392 IVNNKGEMKGSAITGPVAKECADLWPR 472
IVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 69.7 bits (163), Expect = 5e-12
Identities = 31/35 (88%), Positives = 33/35 (94%)
Frame = +3
Query: 78 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGXK 182
MSKRGRGG+AG KFRISLGLPVGAV+NCADNTG K
Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAK 35
>AY058367-1|AAL13596.1| 378|Drosophila melanogaster GH13802p
protein.
Length = 378
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 444 PKNVLICGRVLPQTRAL*LEYTFKISNCVSLSFPSTSKSNPKNYNLRNXHLQCKC 608
PK + +CG+ LP+ R SNCV L + + +N NL N + +C
Sbjct: 178 PKVLKLCGKSLPEDRGK--------SNCVGLMIYESGNNATRNLNLPNIYKDWEC 224
>AE014298-3055|AAF50879.1| 378|Drosophila melanogaster CG1314-PA
protein.
Length = 378
Score = 30.3 bits (65), Expect = 3.9
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 444 PKNVLICGRVLPQTRAL*LEYTFKISNCVSLSFPSTSKSNPKNYNLRNXHLQCKC 608
PK + +CG+ LP+ R SNCV L + + +N NL N + +C
Sbjct: 178 PKVLKLCGKSLPEDRGK--------SNCVGLMIYESGNNATRNLNLPNIYKDWEC 224
>U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein.
Length = 904
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 384 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 214
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842
>BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p
protein.
Length = 369
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 384 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 214
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 250 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 307
>BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p
protein.
Length = 894
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 384 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 214
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832
>AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB,
isoform B protein.
Length = 894
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 384 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 214
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 775 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 832
>AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA,
isoform A protein.
Length = 904
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -2
Query: 384 ALSSKYINTPSRLLNG-FRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLF-RRPL 214
A+ N P LL G F AG F SG P LT+ IM E AAG+L RPL
Sbjct: 785 AMGHSLDNLPPGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPL 842
>Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger
protein protein.
Length = 614
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 326 RQRKPFRRRDGVFIYFEDN 382
R+R+P R+RDG F Y DN
Sbjct: 72 RRRRPVRKRDGTFNYSADN 90
>BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p
protein.
Length = 608
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 326 RQRKPFRRRDGVFIYFEDN 382
R+R+P R+RDG F Y DN
Sbjct: 66 RRRRPVRKRDGTFNYSADN 84
>AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB,
isoform B protein.
Length = 599
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 326 RQRKPFRRRDGVFIYFEDN 382
R+R+P R+RDG F Y DN
Sbjct: 57 RRRRPVRKRDGTFNYSADN 75
>AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA,
isoform A protein.
Length = 599
Score = 29.1 bits (62), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 326 RQRKPFRRRDGVFIYFEDN 382
R+R+P R+RDG F Y DN
Sbjct: 57 RRRRPVRKRDGTFNYSADN 75
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,759,667
Number of Sequences: 53049
Number of extensions: 691321
Number of successful extensions: 1897
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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