Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H18
         (958 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_02_0115 - 11248021-11248101,11249017-11249118                       84   1e-16
05_03_0661 - 16726958-16726966,16727133-16727234                       57   2e-08
02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.0  
05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061     28   9.6  

>01_02_0115 - 11248021-11248101,11249017-11249118
          Length = 60

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 37/52 (71%), Positives = 43/52 (82%)
 Frame = +2

Query: 95  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLK 250
           MAKSKNHT HNQ+ KAH+NGIKKP++ R  ST GMDPKFLRNQR+ +K N K
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGMDPKFLRNQRYSRKHNKK 52


>05_03_0661 - 16726958-16726966,16727133-16727234
          Length = 36

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +2

Query: 95  MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 202
           MAKSKNHT HNQ+ KAH+NGIKKP++ R  ST G +
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPKRHRQTSTKGFE 36


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 20/68 (29%), Positives = 21/68 (30%)
 Frame = -2

Query: 912 RPXGLAXXXPXXKXFXXGXPPXXGKXXXPPXGGXXPXPPPXXXXXXXFXXXGXXXGXPKX 733
           +P   A   P         PP  G    PP  G  P PPP           G   G P  
Sbjct: 320 KPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGP-- 377

Query: 732 KXPLPXGG 709
             P P GG
Sbjct: 378 PPPPPKGG 385


>05_07_0185 - 28257291-28257616,28258202-28258469,28258580-28260061
          Length = 691

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 158 KKPRKTRHESTLGMDPKFLRNQ-RFCKKG 241
           +KP K R    L +  +F+R+Q + CKKG
Sbjct: 454 RKPTKPRQRGKLKLQSQFIRDQNKICKKG 482


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,198,545
Number of Sequences: 37544
Number of extensions: 374719
Number of successful extensions: 860
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2764678640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)