Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H17
         (924 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.8  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   9.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   9.0  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   9.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 507 LPVRDRGRAAQVCRAWRDAADRRS 578
           L  RD+     V R+WR+  D  S
Sbjct: 256 LYTRDQSETYDVLRSWRNLMDEHS 279


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 325 TNGLALPSYRARRRGE 372
           T  L  PSYR + RGE
Sbjct: 566 TKELLSPSYRVKERGE 581


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 242 VFGETRVNGRARDARLPRATAP 177
           VFG T ++   R ARL R   P
Sbjct: 17  VFGNTNLDPPTRPARLRREAKP 38


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 51  SLRIDTTRVTCRQPRPIV 104
           S+R    + TCRQP P++
Sbjct: 479 SIRGAIQQWTCRQPEPLI 496


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = -3

Query: 535 AARPLSRTGSLSNISANNSGYSLEM*VP*GSV 440
           + + L+ TG++S ++ NN+  + ++ +P  S+
Sbjct: 713 STQSLTTTGNVSYLTTNNTSNNSQLQIPRASL 744


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,266
Number of Sequences: 438
Number of extensions: 4130
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)