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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H15
         (928 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    36   0.031
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    36   0.031
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    33   0.29 
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    33   0.38 
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    32   0.67 
U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin cyt...    32   0.67 
Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical pr...    31   1.2  
U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AL110490-3|CAB54449.1|  892|Caenorhabditis elegans Hypothetical ...    31   1.5  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    30   2.0  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    30   2.0  
AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily a...    30   2.0  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    30   2.0  
AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying de...    30   2.7  
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.      29   3.6  
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o...    29   3.6  
Z68215-7|CAA92453.1|  289|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U53333-2|AAA96155.1|  299|Caenorhabditis elegans Collagen protei...    29   4.7  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    29   4.7  
M80650-1|AAA27985.1|  298|Caenorhabditis elegans alpha-collagen ...    29   4.7  
AF410845-1|AAL76233.1|  299|Caenorhabditis elegans cuticular col...    29   4.7  
AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (...    29   4.7  
Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AL034393-8|CAA22313.1|  241|Caenorhabditis elegans Hypothetical ...    29   6.2  
AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen prot...    29   6.2  
Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AF040642-7|AAB94952.1|  329|Caenorhabditis elegans Collagen prot...    28   8.2  

>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PPGR     G     PPPPP
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPP 322


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 36.3 bits (80), Expect = 0.031
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PPGR     G     PPPPP
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPP 332


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 473  PXPPPXPPGRXXSVXGEXEXXPPPPPXFT 387
            P PPP PP    +  G     PPPPP F+
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPPLFS 1384


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP    ++ G     PPPPP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPP 584


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP       G     PPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPP 655



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP    +V       PPPPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPP 656



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP +   +       PPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPP 634



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP P G      G     PPPPP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPP 657



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP             PPPPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPP 635


>U58751-4|AAN84881.1|  607|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform a
           protein.
          Length = 607

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP       G     PPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPP 481



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP    +V       PPPPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPP 482



 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP +   +       PPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPP 460



 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP P G      G     PPPPP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPP 483



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP             PPPPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPP 461


>Z82095-2|CAB05027.2|  602|Caenorhabditis elegans Hypothetical
           protein ZK849.4 protein.
          Length = 602

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PP    ++    E  PPPPP
Sbjct: 483 PPPSPPALPPALPNPNEPPPPPPP 506


>U23515-9|AAP82644.1|  360|Caenorhabditis elegans Hypothetical
           protein R144.4a protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PP    SV       PPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178


>U23515-8|AAP82645.1|  362|Caenorhabditis elegans Hypothetical
           protein R144.4b protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PP    SV       PPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178


>AL110490-3|CAB54449.1|  892|Caenorhabditis elegans Hypothetical
           protein Y48B6A.3 protein.
          Length = 892

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 397 GGGGGXXSXSPXTDXXRPGGXGGGXG 474
           GGGGG     P     R GG GGG G
Sbjct: 843 GGGGGGSYHQPYNQDQRRGGRGGGGG 868



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +1

Query: 388 VKXGGGGGXXSXSPXTDXXRPGGXGGG 468
           V+ GGGGG        D  R GG GGG
Sbjct: 766 VRGGGGGGGGYRGNSYDDRRGGGGGGG 792


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPP 399
           PPP PPG    + G     PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PPG    + G     PPPPP
Sbjct: 727 PPPPPPGGLPPITG---GPPPPPP 747


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPP 399
           PPP PPG    + G     PPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PPG    + G     PPPPP
Sbjct: 727 PPPPPPGGLPPITG---GPPPPPP 747


>AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 268 protein.
          Length = 881

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PP    S+  +    PPPPP
Sbjct: 68  PPPPPPPPLISILQQAPPPPPPPP 91


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPP 399
           PPP PPG    + G     PPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPP 348



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPPP 396
           PPP PPG    + G     PPPPP
Sbjct: 310 PPPPPPGGLPPITG---GPPPPPP 330


>AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying
           defective protein 4,isoform a protein.
          Length = 780

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 397 GGGGGXXSXSPXTDXXRPGGXGGGXGSXHSK 489
           GGGGG    S       PGG GGG     SK
Sbjct: 10  GGGGGGGGASGGAGGGAPGGGGGGIRGFFSK 40


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXXPPPP 399
           PPP PP R     G     PPPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPP 144


>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
          Length = 1475

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 476 DPXPPPXPPGRXXSVXGEXEXXPPPPP 396
           DP PPP P     S        PPPPP
Sbjct: 819 DPPPPPKPQVSTSSRMSSVPSHPPPPP 845


>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
           pal-1 protein 3,isoform a protein.
          Length = 1475

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 476 DPXPPPXPPGRXXSVXGEXEXXPPPPP 396
           DP PPP P     S        PPPPP
Sbjct: 819 DPPPPPKPQVSTSSRMSSVPSHPPPPP 845


>Z68215-7|CAA92453.1|  289|Caenorhabditis elegans Hypothetical
           protein C53B4.5 protein.
          Length = 289

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 822 PGPPXXPSPQGXGGXXNPPXXP 887
           PGP   P PQG  G   PP  P
Sbjct: 143 PGPAGPPGPQGNKGPLGPPGPP 164


>U53333-2|AAA96155.1|  299|Caenorhabditis elegans Collagen protein
           34 protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 789 GXXPQXKXXRXPGPPXXPSPQGXGGXXNPPXXP 887
           G  PQ        PP  P PQG  G   PP  P
Sbjct: 130 GRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPP 162


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP    S        PPPPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPP 522


>M80650-1|AAA27985.1|  298|Caenorhabditis elegans alpha-collagen
           protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 789 GXXPQXKXXRXPGPPXXPSPQGXGGXXNPPXXP 887
           G  PQ        PP  P PQG  G   PP  P
Sbjct: 130 GRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPP 162


>AF410845-1|AAL76233.1|  299|Caenorhabditis elegans cuticular
           collagen RAM-4 protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 789 GXXPQXKXXRXPGPPXXPSPQGXGGXXNPPXXP 887
           G  PQ        PP  P PQG  G   PP  P
Sbjct: 130 GRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPP 162


>AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical
           protein T22D1.2 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPPXFT 387
           P PPP    +  S  G     PPPPP  T
Sbjct: 168 PPPPPTGEPQDLSTEGNASRRPPPPPKGT 196



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXX--PPPPPXFT 387
           PPP P G    + GE      PPPPP  T
Sbjct: 43  PPPPPTGEPQDLSGEGNASRRPPPPPKGT 71



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXX--PPPPPXFT 387
           PPP P G    + GE      PPPPP  T
Sbjct: 106 PPPPPTGEPQDLSGEGNASRRPPPPPKGT 134



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXX--PPPPPXFT 387
           PPP P G    + GE      PPPPP  T
Sbjct: 137 PPPPPTGEPQDLSGEGNASRRPPPPPKGT 165



 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -3

Query: 467 PPPXPPGRXXSVXGEXEXX--PPPPPXFT 387
           PPP P G    + GE      PPPPP  T
Sbjct: 261 PPPPPTGEPQDLSGEGNASRRPPPPPKGT 289



 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPPXFT 387
           P PPP    +  S  G     PPPPP  T
Sbjct: 199 PPPPPTGEPQDLSAEGYASRRPPPPPKGT 227


>AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (grd
           related) protein19 protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 633 CEGRXGGRXXCXXPPXXPFSGXCPFXGR 550
           C G  GG   C  PP  P  G C   GR
Sbjct: 33  CGGGGGGGGCCAPPPPPPVCGGCGCGGR 60


>Z81034-4|CAB02729.1|  541|Caenorhabditis elegans Hypothetical
           protein C15C6.3 protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 473 PXPPPXPPGRXXSVXGEXEXXPPPPP 396
           P PPP PP        E E  PPPPP
Sbjct: 476 PPPPPPPPPE-----NEPEEFPPPPP 496


>AL034393-8|CAA22313.1|  241|Caenorhabditis elegans Hypothetical
           protein Y18D10A.10 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +1

Query: 397 GGGGGXXSXSPXTDXXRPGGXGGGXGSXHSKAXXTPPPRXXGXRRKE 537
           GGG G  S S  ++  R G  G G G  H +     PPR    R  E
Sbjct: 28  GGGFGSRSSSSSSEEGR-GHHGHGHGHHHGRPPRPRPPRPPVSREPE 73


>AF040646-1|AAK31537.1|  530|Caenorhabditis elegans Collagen protein
           70 protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 886 GXXGGLXXPPXPWGEGXXGGPG 821
           G  GGL  P  P G G  GGPG
Sbjct: 125 GNPGGLGGPGNPGGPGTPGGPG 146


>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +1

Query: 400 GGGGXXSXSPXTDXXRPGGXGGGXGSXHSKAXXTPPPRXXG 522
           GGGG             GG GGG G     A   PPP   G
Sbjct: 23  GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGG 63


>AF040642-7|AAB94952.1|  329|Caenorhabditis elegans Collagen protein
           68 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +3

Query: 822 PGPPXXPSPQGXGGXXNPPXXP 887
           PGPP  P PQG  G    P  P
Sbjct: 218 PGPPGPPGPQGPPGADGLPGNP 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,877,058
Number of Sequences: 27780
Number of extensions: 168054
Number of successful extensions: 2015
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1841
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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