Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H13
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0253 + 1888831-1889399,1890121-1890526,1890980-1891195,189...    34   0.18 
05_06_0178 + 26167825-26168057,26168772-26169078                       29   5.0  
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517...    29   5.0  
10_08_0913 + 21527267-21527377,21528290-21528742                       29   6.7  
05_03_0635 - 16446805-16447716                                         29   6.7  
08_02_0265 - 15012662-15013918                                         28   8.8  
04_01_0022 + 324422-324445,324870-325265,325366-325546,325781-32...    28   8.8  
01_01_0759 + 5855467-5855639,5855753-5855815,5855914-5856057,585...    28   8.8  

>07_01_0253 +
           1888831-1889399,1890121-1890526,1890980-1891195,
           1891441-1891548,1892085-1892359,1892462-1892714
          Length = 608

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = -1

Query: 682 PPPPTPENSLCRAKDAQLDHGQRLLFGGLSAALSTFLDLFDDDISDGLLGGRAAC*QLVL 503
           PP P P  SL  A++A L   +   F G   +  T  D  D     GL    A     VL
Sbjct: 54  PPAPPPSTSLVAAEEASLAPRRTYRFPGSVPSSPTLPDTAD----GGLAAAAAVADDAVL 109

Query: 502 TVSL-VHGAVNGE--VCAVRGGRL 440
             +L V  AV GE  V A+RGG++
Sbjct: 110 RRALEVRRAVAGEVLVAALRGGKV 133


>05_06_0178 + 26167825-26168057,26168772-26169078
          Length = 179

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -1

Query: 712 RRGGAGALCIPPPPTPENSLCRAKDAQLDH 623
           R   A A+C PPPP  EN +       + H
Sbjct: 147 RAAAASAVCTPPPPARENMIVATASYHMAH 176


>01_03_0280 -
           14546334-14546815,14546894-14547560,14550333-14551754,
           14552831-14553127
          Length = 955

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 715 RRRGGAGALCIPPPPTPENSLCRAKDA 635
           RRR  A A+  PPPP P     R  DA
Sbjct: 26  RRRRHAAAVATPPPPPPRRRANRCPDA 52


>10_08_0913 + 21527267-21527377,21528290-21528742
          Length = 187

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +2

Query: 407 KVEPNPNKH--FKQTTPTYCADLTIDGTVYQGYGENKLLARSAAAEQAVRDIIIKKIK 574
           K   NP+KH  FKQ T  Y    T+D  + + +    L  R+   + AV     K IK
Sbjct: 66  KRSKNPHKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRTTCRQVAVAGTNSKDIK 123


>05_03_0635 - 16446805-16447716
          Length = 303

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 700 AGALCIPPPPTPENSLCRAKDAQLDH 623
           AG   +PPPP P   LC A    ++H
Sbjct: 170 AGVPVLPPPPPPAKRLCVAPPTGVEH 195


>08_02_0265 - 15012662-15013918
          Length = 418

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
 Frame = +3

Query: 666 GVGGGGIQSAPAPP------RRRQCVGLG 734
           G GGGG    PAPP      RR QC G G
Sbjct: 366 GGGGGGGADRPAPPAACMAGRRNQCFGFG 394


>04_01_0022 +
           324422-324445,324870-325265,325366-325546,325781-326072,
           326389-326461,326610-326700,326815-326894,326992-327234
          Length = 459

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 390 CSLGIISLITMTAFFGVRSRLRCWFCLRRRSLFVTFFTH 274
           C LG+ S +T T+     +R   W     + LFV FFTH
Sbjct: 339 CILGLFSSLTTTSMV---ARRYVWIYATIQFLFVVFFTH 374


>01_01_0759 +
           5855467-5855639,5855753-5855815,5855914-5856057,
           5856146-5856920
          Length = 384

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3

Query: 651 HKLFSGVGGGGIQSAPAPPRRRQCVG 728
           H+ F G GGGG +SA A  R R   G
Sbjct: 169 HRAFGGGGGGGHESASATTRTRWVKG 194


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,114,945
Number of Sequences: 37544
Number of extensions: 511637
Number of successful extensions: 2496
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2482
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)