Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_H13
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical p... 31 0.85
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 30 2.0
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 30 2.0
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 30 2.0
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 30 2.0
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 29 6.0
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 29 6.0
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 29 6.0
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 29 6.0
AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosi... 28 7.9
AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosi... 28 7.9
AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosi... 28 7.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 7.9
AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical ... 28 7.9
>U64845-12|AAC48025.1| 475|Caenorhabditis elegans Hypothetical
protein F45F2.1 protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.85
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 417 GSTLKLLAICSLGIISLITMTAFFGVRSRLRCWFCLRRRSLFVTFFTHQIL 265
G T K I S+G I L ++ F +R W C+ R L++ F Q++
Sbjct: 5 GPTFK--TIFSIGAIVLWSIELFLAFAQSVRPWICILRTCLYIIFHVTQVV 53
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 341 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 520
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 521 RSAAAEQAVRDI 556
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 341 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 520
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 521 RSAAAEQAVRDI 556
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 341 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 520
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 176 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 226
Query: 521 RSAAAEQAVRDI 556
+ +E VRD+
Sbjct: 227 KQKCSELVVRDL 238
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 155 YMHTIEKKSHISRLWRFYNVSRQGSGRQSFQPRN 256
Y H +SH RFY+ ++GS RQ +PR+
Sbjct: 18 YGHRERTRSHSGSPSRFYSKDKRGSSRQGVRPRD 51
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 341 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 520
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 521 RSAAAEQAVRDI 556
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 341 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 520
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 110 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 160
Query: 521 RSAAAEQAVRDI 556
+ +E VRD+
Sbjct: 161 KQKCSELVVRDL 172
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 30.3 bits (65), Expect = 2.0
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 341 TPKNAVMVINEMIPKEQIANNFKVEPNPNKHFKQTTPTYCADLTIDGTVYQGYGENKLLA 520
T K+ M+++E+ K+ +VE P K YC L ++G +Q NK A
Sbjct: 176 TGKSPAMLLHELF-KDVSEEYTEVEGVPKK--------YCCTLKVNGRTFQMESVNKKAA 226
Query: 521 RSAAAEQAVRDI 556
+ +E VRD+
Sbjct: 227 KQKCSELVVRDL 238
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 712 RRGGAGALCIPPPPTPENSLCRAKDAQLDHGQRLLFGGL 596
RR AL + PPP P N L AKD ++ + L GL
Sbjct: 110 RRPPRRALALSPPPAPSNDLL-AKDLEMIEMHQNLVAGL 147
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 712 RRGGAGALCIPPPPTPENSLCRAKDAQLDHGQRLLFGGL 596
RR AL + PPP P N L AKD ++ + L GL
Sbjct: 108 RRPPRRALALSPPPAPSNDLL-AKDLEMIEMHQNLVAGL 145
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 712 RRGGAGALCIPPPPTPENSLCRAKDAQLDHGQRLLFGGL 596
RR AL + PPP P N L AKD ++ + L GL
Sbjct: 108 RRPPRRALALSPPPAPSNDLL-AKDLEMIEMHQNLVAGL 145
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -1
Query: 712 RRGGAGALCIPPPPTPENSLCRAKDAQLDHGQRLLFGGL 596
RR AL + PPP P N L AKD ++ + L GL
Sbjct: 110 RRPPRRALALSPPPAPSNDLL-AKDLEMIEMHQNLVAGL 147
>AF016441-6|AAX55687.1| 440|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform b protein.
Length = 440
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 432 CLFGFGSTLKLLAICSLGIISLITMTAFFGV 340
C FG++L LL+ S G S IT T+F G+
Sbjct: 256 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 286
>AF016441-5|AAX55688.1| 408|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform c protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 432 CLFGFGSTLKLLAICSLGIISLITMTAFFGV 340
C FG++L LL+ S G S IT T+F G+
Sbjct: 256 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 286
>AF016441-4|AAX55686.1| 425|Caenorhabditis elegans Paps (adenosine
3'-phosphate 5'-phosphosulfate) transporter protein 1,
isoform a protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 432 CLFGFGSTLKLLAICSLGIISLITMTAFFGV 340
C FG++L LL+ S G S IT T+F G+
Sbjct: 241 CTIAFGASLFLLSSSSKGAGSTITYTSFSGM 271
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 706 GGAGALCIPPPPTPENSLC 650
GG G C PPPP P C
Sbjct: 23 GGGGGCCAPPPPPPCGGGC 41
>AC006662-3|AAF39895.1| 368|Caenorhabditis elegans Hypothetical
protein H23L24.4 protein.
Length = 368
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -1
Query: 442 LLEVLVRVWLHFEIIGNLLLRNHFVDHHDCILRREESPEVLVLSAATFLVCH 287
L+ +L+ L+F I+ N+ R DH + S +L+ F +CH
Sbjct: 217 LVPLLLLSVLNFRILSNISNRRVSFDHKSRFAQERRSVTLLISIVTMFFLCH 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,229,260
Number of Sequences: 27780
Number of extensions: 378440
Number of successful extensions: 1332
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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