Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H09
         (930 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11; Ditrys...    48   3e-04
UniRef50_Q9VGU5 Cluster: CG6621-PA; n=2; Drosophila melanogaster...    41   0.052
UniRef50_Q0SAY7 Cluster: Probable glutamyl-tRNA(Gln) amidotransf...    34   6.0  
UniRef50_A3U4H0 Cluster: Putative uncharacterized protein; n=1; ...    34   6.0  
UniRef50_A4HEF1 Cluster: Chromosome 25; n=1; Leishmania brazilie...    34   6.0  
UniRef50_Q0J086 Cluster: Os09g0524500 protein; n=1; Oryza sativa...    33   7.9  

>UniRef50_P13276 Cluster: Apolipophorin-3 precursor; n=11;
           Ditrysia|Rep: Apolipophorin-3 precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 189

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 27/54 (50%), Positives = 32/54 (59%)
 Frame = +2

Query: 257 QQFNSLTKSKDAXDFSKAWKDGSKSVVGXGQRXSPKXSXEXSEKPNGKAKEGLE 418
           +QFNSL  SK+  DF+KA KDGS SV+      S       S+  NGKAKE LE
Sbjct: 48  EQFNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQGAISD-ANGKAKEALE 100



 Score = 36.3 bits (80), Expect = 1.1
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
 Frame = +1

Query: 124 MAAKFVV-LFACIALAQGSEWCDANAP---DFFKDIEHHTKEFHKNF 252
           MAAKFVV L AC+AL+  S     +AP   + F+++E H KEF K F
Sbjct: 1   MAAKFVVVLAACVALSH-SAMVRRDAPAGGNAFEEMEKHAKEFQKTF 46


>UniRef50_Q9VGU5 Cluster: CG6621-PA; n=2; Drosophila
           melanogaster|Rep: CG6621-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 872

 Score = 40.7 bits (91), Expect = 0.052
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +3

Query: 90  SPPHSVSRTVHHGRQVRSSLRLHRSGPRKRMVRRERSRLLQGHRTPHQGVP*EF*NN-SL 266
           S   S SR    GR  RSSLR  RSG R R + R RSR  + +       P  + N   +
Sbjct: 691 SRSRSRSRNRRLGRSTRSSLRSRRSGSRSRSISRSRSRRRRTYSRSRSPSPRSYGNRFVI 750

Query: 267 TRSPSQRTHXTSARLGRTGPNPWLE 341
            R  ++RT  + +   R  P+P L+
Sbjct: 751 GRYRNRRTRRSRSFHRRRSPSPILK 775


>UniRef50_Q0SAY7 Cluster: Probable glutamyl-tRNA(Gln)
           amidotransferase subunit A; n=1; Rhodococcus sp.
           RHA1|Rep: Probable glutamyl-tRNA(Gln) amidotransferase
           subunit A - Rhodococcus sp. (strain RHA1)
          Length = 453

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -1

Query: 228 VVFDVLEEVGSVRVAPFASLGQSDAGEENYELGGHDVLFERLSA 97
           +V  +L E+G V V P AS+     GEE +++GGH + + +  A
Sbjct: 363 LVHRLLGEMGDVLVLPVASIPAPPLGEELFDVGGHSLTWSQALA 406


>UniRef50_A3U4H0 Cluster: Putative uncharacterized protein; n=1;
           Croceibacter atlanticus HTCC2559|Rep: Putative
           uncharacterized protein - Croceibacter atlanticus
           HTCC2559
          Length = 119

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +2

Query: 272 LTKSKDAXDFS-KAWKDGSKSVVGXGQRXSPKXSXEXSEKPNGKAKEGL 415
           LTK KDA +FS + WK+ ++S      R +   S   + K NGK K+ L
Sbjct: 22  LTKDKDALEFSSEKWKNWTESETELSTRWNMIESLRENHKLNGKTKQEL 70


>UniRef50_A4HEF1 Cluster: Chromosome 25; n=1; Leishmania
           braziliensis|Rep: Chromosome 25 - Leishmania
           braziliensis
          Length = 310

 Score = 33.9 bits (74), Expect = 6.0
 Identities = 30/107 (28%), Positives = 39/107 (36%)
 Frame = +3

Query: 90  SPPHSVSRTVHHGRQVRSSLRLHRSGPRKRMVRRERSRLLQGHRTPHQGVP*EF*NNSLT 269
           +P H V+  VHH R  RSS R       +R  RR            HQ +       +L+
Sbjct: 34  TPRHPVALGVHHSRSSRSSSRRSSRRSSRRSSRRSSPACGDNFPALHQAIH----GRNLS 89

Query: 270 RSPSQRTHXTSARLGRTGPNPWLEXVNAXRQXFPXNXRKNQTGRPRR 410
           R  S RTH  +        +PW   V   R     + R    G  RR
Sbjct: 90  R--SSRTHGANFSRVSHSSSPWAIAVALARGVNLLHCRHGTRGASRR 134


>UniRef50_Q0J086 Cluster: Os09g0524500 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os09g0524500 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 223

 Score = 33.5 bits (73), Expect = 7.9
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +3

Query: 81  WFASPPHSVSRTVHHGRQ--VRSSLRLHRSGPRKRMVRRERSRLLQGHRTPHQG 236
           WF SP + ++ TV  GR+   R++ R H +  R+R   R R+R   G R P  G
Sbjct: 63  WFLSPSNRLTTTVAPGRRGGSRAARRRHPAARRRRRGVRRRARSGGGWRRPAAG 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,445,278
Number of Sequences: 1657284
Number of extensions: 8905532
Number of successful extensions: 27866
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27523
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85670899699
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)