Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H09
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0603 - 11150739-11150746,11150791-11151340                       30   2.3  
08_02_1113 - 24384471-24384644,24384740-24384959,24385034-243851...    29   4.0  

>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 681 GAPPPPXXGXFXXPPPXXKI 740
           G PPPP  G F  PPP  ++
Sbjct: 60  GVPPPPPLGSFFVPPPQSRV 79


>08_02_1113 -
           24384471-24384644,24384740-24384959,24385034-24385176,
           24385265-24385321,24385476-24385575,24385694-24385755,
           24386120-24386138,24386269-24386322,24386441-24386625
          Length = 337

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -1

Query: 291 ASFDLVSELNCCSKILMELLGVVFDVLEEVGSVRVAPFASLGQSDAGEENYEL 133
           A+F   SE++ C K LMELL  V +    + S  +APF +   +  G +  ++
Sbjct: 114 AAFGTSSEVDGCEKYLMELLTRVVERKNNLLSSHMAPFDATTAAMQGADGTQM 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,431,836
Number of Sequences: 37544
Number of extensions: 271921
Number of successful extensions: 988
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)