Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H09
         (930 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.       31   4.5  
BC041331-1|AAH41331.2| 1121|Homo sapiens ZNF335 protein protein.       31   7.9  
AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335...    31   7.9  
AK026157-1|BAB15379.1|  829|Homo sapiens protein ( Homo sapiens ...    31   7.9  
AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zip...    31   7.9  

>BC057783-1|AAH57783.1|  275|Homo sapiens SFRS2B protein protein.
          Length = 275

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = +3

Query: 96  PHSVSRTVHHGRQVRSSLRLHRSGPRKRMVRRERSR-LLQGH---RTPHQGVP*EF*NNS 263
           P   SR   +GR+ RS  R HRS  R     R RSR   +G    R+P+   P  +  + 
Sbjct: 105 PRGRSRGGGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSP--YSRSR 162

Query: 264 LTRSPSQRTHXTSARLG 314
            +RSP  R+    +R G
Sbjct: 163 YSRSPYSRSRYRESRYG 179


>BC041331-1|AAH41331.2| 1121|Homo sapiens ZNF335 protein protein.
          Length = 1121

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 76   SPGSHLLRTQSLEQYIMAAKFVVLFACIALAQGSEWCDANAPDFFKDIEHHTKEF 240
            SPG  L+    LE    +A   V  A +A AQG    D   P+  + ++H   E+
Sbjct: 1059 SPGQQLVTQAQLEAAAHSAVTAVADAAMAQAQGLFGTDETVPEHIQQLQHQGIEY 1113


>AL162458-3|CAC10457.1| 1342|Homo sapiens zinc finger protein 335
            protein.
          Length = 1342

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 76   SPGSHLLRTQSLEQYIMAAKFVVLFACIALAQGSEWCDANAPDFFKDIEHHTKEF 240
            SPG  L+    LE    +A   V  A +A AQG    D   P+  + ++H   E+
Sbjct: 1280 SPGQQLVTQAQLEAAAHSAVTAVADAAMAQAQGLFGTDETVPEHIQQLQHQGIEY 1334


>AK026157-1|BAB15379.1|  829|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22504 fis, clone HRC11430. ).
          Length = 829

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 76  SPGSHLLRTQSLEQYIMAAKFVVLFACIALAQGSEWCDANAPDFFKDIEHHTKEF 240
           SPG  L+    LE    +A   V  A +A AQG    D   P+  + ++H   E+
Sbjct: 767 SPGQQLVTQAQLEAAAHSAVTAVADAAMAQAQGLFGTDETVPEHIQQLQHQGIEY 821


>AF395833-1|AAN09900.1| 1342|Homo sapiens zinc-finger/leucine-zipper
            co-transducer NIF1 protein.
          Length = 1342

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 76   SPGSHLLRTQSLEQYIMAAKFVVLFACIALAQGSEWCDANAPDFFKDIEHHTKEF 240
            SPG  L+    LE    +A   V  A +A AQG    D   P+  + ++H   E+
Sbjct: 1280 SPGQQLVTQAQLEAAAHSAVTAVADAAMAQAQGLFGTDETVPEHIQQLQHQGIEY 1334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,312,626
Number of Sequences: 237096
Number of extensions: 1514228
Number of successful extensions: 5153
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5099
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)