Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H09
         (930 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA...    41   0.003
AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p pro...    38   0.020

>AE014297-1234|AAF54579.2|  872|Drosophila melanogaster CG6621-PA
           protein.
          Length = 872

 Score = 40.7 bits (91), Expect = 0.003
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = +3

Query: 90  SPPHSVSRTVHHGRQVRSSLRLHRSGPRKRMVRRERSRLLQGHRTPHQGVP*EF*NN-SL 266
           S   S SR    GR  RSSLR  RSG R R + R RSR  + +       P  + N   +
Sbjct: 691 SRSRSRSRNRRLGRSTRSSLRSRRSGSRSRSISRSRSRRRRTYSRSRSPSPRSYGNRFVI 750

Query: 267 TRSPSQRTHXTSARLGRTGPNPWLE 341
            R  ++RT  + +   R  P+P L+
Sbjct: 751 GRYRNRRTRRSRSFHRRRSPSPILK 775


>AY102684-1|AAM27513.1|  872|Drosophila melanogaster LD24134p
           protein.
          Length = 872

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +3

Query: 90  SPPHSVSRTVHHGRQVRSSLRLHRSGPRKRMVRRERSRLLQGHRTPHQGVP*EF*NN-SL 266
           S   S SR    GR  RSSLR  RSG   R + R RSR  + +       P  + N   +
Sbjct: 691 SRSRSRSRNRRLGRSTRSSLRSRRSGSGSRSISRSRSRRRRTYSRSRSPSPRSYGNRFVI 750

Query: 267 TRSPSQRTHXTSARLGRTGPNPWLE 341
            R  ++RT  + +   R  P+P L+
Sbjct: 751 GRYRNRRTRRSRSFHRRRSPSPILK 775


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,249,157
Number of Sequences: 53049
Number of extensions: 445574
Number of successful extensions: 1827
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)