Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H07
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    28   0.11 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   9.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +2

Query: 350 PTKRRRCSPFAASPSTSPGLK-----TSESKPSSFGESVSAPVKITPERMAQE 493
           P  +   +P ++S  TSP        TS   P+S   + SAP+ I  +R A +
Sbjct: 13  PAPQSAATPISSSGMTSPAAAPPPATTSSGSPASVASNASAPLHIPAKRAAYD 65


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +3

Query: 417 QNRNHLHLENPLVHL*KLPQNAWHKRFMMRLNDCIDVDSCAWPTALLHH---AHH 572
           +  N LH  +  +H     QN  H+     +N C  +   +   A+LHH   +HH
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHH 355



 Score = 23.0 bits (47), Expect = 3.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 444 SPNEDGFDSDVFNPGLVLGLAANG 373
           SP    F S + N G+  G+A NG
Sbjct: 43  SPQGASFGSSMLNSGMPGGMAMNG 66


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -1

Query: 781  GPSQRLHTVQQAXC*GTDSYSARRSHLLIMEHSLTDHTNLFKSE*CTSAGTLWAMS 614
            G S  L  +Q+  C  T++++  R+H      S+  +TN   +   T+ G + A S
Sbjct: 986  GSSHPLAALQKL-CDKTETHTNNRTHSATSNSSVNANTNNIPTNAGTTPGAILAFS 1040


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 132 LKHRTLL*LENELYIFFVYYLYGA*Y 209
           +KH   L L N+  I F YY Y A Y
Sbjct: 46  VKHFHPLALSNKNAIDFNYYYYAATY 71


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 627 NVPALVHYSLLNRFV*SVSECSMIRRW 707
           NVP+L+ +   + +V +V   S+I RW
Sbjct: 437 NVPSLIIHVSTSAYVATVWINSVINRW 463


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,301
Number of Sequences: 336
Number of extensions: 4641
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)