Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_H06
(953 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 46 1e-05
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 38 0.002
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 35 0.015
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 33 0.045
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.32
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 31 0.32
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 28 2.2
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 27 2.9
SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyce... 27 5.1
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 26 6.8
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 26 6.8
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 9.0
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 26 9.0
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +2
Query: 446 TGMAFGF-SAVALPQLQNPNSTL--FISEDQASWIASLSSAGTPIGCILSGYLMDLIGRR 616
+G+ FG+ + V L S L +S Q I S +S I SG+L D +GR+
Sbjct: 91 SGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGWLADWVGRK 150
Query: 617 XXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGFGSGM 733
G ++++ S N+ MM +G +VG+G G+
Sbjct: 151 RLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGL 189
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/106 (24%), Positives = 48/106 (45%)
Frame = +2
Query: 416 SFLANLGTINTGMAFGFSAVALPQLQNPNSTLFISEDQASWIASLSSAGTPIGCILSGYL 595
+F A +G + G G + AL + ++ +I S +S G +G I++G L
Sbjct: 91 AFAAGIGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGAL 150
Query: 596 MDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGFGSGM 733
D GR+ G I+ T+ ++ M +G ++G+G G+
Sbjct: 151 ADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGI 196
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 35.1 bits (77), Expect = 0.015
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Frame = +2
Query: 506 TLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWIL-ISTSVN 682
T S + + + + GT +GC+LS L D G+R G I+ ++T +
Sbjct: 50 TYSYSSARQGLLVGMVNTGTTVGCLLSSPLGDRFGKRKCIMGWTLVYITGVIVQLTTIPS 109
Query: 683 IPMMYIGXLLVGFGSGMVGXPAKGVHVRSITTHLXXXLGALASVGVSPGV 832
M + + G G G + A G S H+ + + ++ G+
Sbjct: 110 WVQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFITLGI 159
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 33.5 bits (73), Expect = 0.045
Identities = 29/115 (25%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Frame = +2
Query: 494 NP-NSTLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILIS 670
NP T S + I + + G+ GCILS LMD IG+R G IL
Sbjct: 45 NPVTDTYSYSSARQGLITGMVNVGSMTGCILSSPLMDRIGKRVSIMFWTIVYLIGIILQV 104
Query: 671 TSV-NIPMMYIGXLLVGFGSGMVGXPAKGVHVRSITTHLXXXLGALASVGVSPGV 832
T+V + + + + G G + A G L + + V+ G+
Sbjct: 105 TAVPSWVQIMVAKIWTGLAIGALSVLAPGFQSEVAPATLRGTIVTTYQLAVTGGI 159
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 30.7 bits (66), Expect = 0.32
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Frame = +2
Query: 494 NP-NSTLFISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILIS 670
NP T S + I + + G+ GC++S D IG+R G I+
Sbjct: 45 NPVTDTYSYSSARQGLITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQV 104
Query: 671 TSV-NIPMMYIGXLLVGFGSGMVGXPAKGVHVRSITTHLXXXLGALASVGVSPGV 832
T+V + + + + G G G + A G H+ + + V+ G+
Sbjct: 105 TAVPSWVQIMVAKIWTGLGIGALSVLAPGYQSEVAPPHIRGTIVVTYQLCVTAGI 159
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 30.7 bits (66), Expect = 0.32
Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +2
Query: 539 IASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV-NIPMMYIGXLLV 715
I + + G+ GC LS LMD IG+R G IL T+V + + + +
Sbjct: 61 ITGMVNVGSFFGCFLSSPLMDRIGKRTSIMFWTIVYLIGIILQVTAVPSWVQIMVAKIWT 120
Query: 716 GFGSGMVGXPAKGVHVRSITTHLXXXLGALASVGVSPGV 832
G G + A G L + + V+ G+
Sbjct: 121 GLSIGALSVLAPGFQSEVAPADLRGTIVTTYQLAVTGGI 159
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 743 GHR-PYPNRSQPAAYLYTSWEYLQRSKSESIRE 648
GH P+P++ PAAY+ + S+ +S+RE
Sbjct: 37 GHYGPHPHKEHPAAYVAAKTGFNATSRRQSVRE 69
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +2
Query: 515 ISEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV-NIPM 691
+S + + + + G+ GCI+S + D G+R G I+ T+V +
Sbjct: 57 LSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQ 116
Query: 692 MYIGXLLVGFGSGMVGXPAKG 754
+ + + G G G + A G
Sbjct: 117 IMVAKIWTGIGIGALSVLAPG 137
>SPBC1773.10c |||asparagine-tRNA ligase Ded81 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 568
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Frame = +2
Query: 209 SEAKPFTMALHVLDTASSISSRMPKYGSMNESXPF-------IKNGVPATITKKVLIEKC 367
S+ PF A+H L+T ++ + + K GS E P K GV KK +
Sbjct: 34 SQTSPFKTAIHALETDANCTIFVKKNGS-EEFEPITTNALKKAKKGVEQAAKKKAKAAEA 92
Query: 368 KPGKEGRGKALKQVFASFL 424
+ R A K+ A L
Sbjct: 93 EAAAAARAAAAKEAEAKRL 111
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 518 SEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSV 679
S + I + + G+ GC+LS + D IG+R G I+ T+V
Sbjct: 22 SSSRQGLITGMVNVGSFFGCLLSSPVADKIGKRLSIIVWTTVYLIGIIIQVTTV 75
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 581 LSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGFGSGMVG 739
L G L D+ GRR G S ++P + + L G G G +G
Sbjct: 85 LYGRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLG 137
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 25.8 bits (54), Expect = 9.0
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +2
Query: 482 PQLQNPNSTLFISEDQASWIA-SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGW 658
P +Q+ L+ Q S + S+ G +G + G L DL+GR+
Sbjct: 102 PGVQDSVMELWHLSSQVSLLGQSMFVLGVALGPLFLGPLSDLLGRKLVYIGSLIIYVCFC 161
Query: 659 ILISTSVNIPMMYIGXLLVG-FGSGMVGXPAKGV 757
I + + N + I L++G GS +G A V
Sbjct: 162 ISCALARNYAQLVISMLIMGVVGSTALGNVAGAV 195
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 303 DSFIEPYLGILELIDE--AVSKTWS 235
D F+E LG+LE+ E + KTWS
Sbjct: 477 DQFVESCLGVLEVNPEWSGIVKTWS 501
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,727,924
Number of Sequences: 5004
Number of extensions: 76931
Number of successful extensions: 203
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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