Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_H06
(953 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 41 0.001
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 33 0.30
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 32 0.53
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 32 0.70
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 32 0.70
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 31 1.6
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 31 1.6
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical pr... 28 8.6
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 41.1 bits (92), Expect = 0.001
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Frame = +2
Query: 407 VFASFLANLGTINTGMAFGF--SAVALPQLQNPNSTLFISEDQASW---IASLSSAGTPI 571
+F LA I G FG+ S V+ L P++ D W + S+S +
Sbjct: 23 LFVYILAAASVIG-GFLFGYDTSVVSAAMLYMPDAPGLKPMDTV-WQEVLVSISPGMAAV 80
Query: 572 GCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGFGSGMVGXPAK 751
G ++SG D IGRR G ++ + SVN M+ +G +L+G G
Sbjct: 81 GSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVP 140
Query: 752 GVHVRSITTHLXXXLGALASVGVSPG 829
+ TH+ L A ++ +S G
Sbjct: 141 VYLGETAPTHVRGMLVAAFALMISFG 166
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 560 GTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGF 721
GT +G ++ GYL D IGRR IL + ++ YI LVGF
Sbjct: 116 GTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGF 169
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +2
Query: 545 SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGFG 724
S+ G G I+ G + D GR+ GW+++ S N+ I +VGF
Sbjct: 133 SVQMFGVLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGFF 192
Query: 725 SG 730
+G
Sbjct: 193 TG 194
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +2
Query: 518 SEDQASWIASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMY 697
S + ++SL G IG + G+L D +GR+ G IL++ S+ + M
Sbjct: 111 SNQTTAMMSSLLMWGALIGSFVCGFLSDRLGRKPVYLGCLLMITIGHILLTFSMYLSWMT 170
Query: 698 IGXLLVGFG 724
I L G
Sbjct: 171 INATLAAMG 179
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 31.9 bits (69), Expect = 0.70
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = +2
Query: 515 ISEDQASWI----ASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTS-- 676
+S+ QA +I S+ S G G SG+L D GR+ + +STS
Sbjct: 91 LSQYQADFIWSVAVSMFSVGGMFGSFCSGFLADKFGRKSTLLYNNILALLAAVCLSTSKL 150
Query: 677 VNI-PMMYIGXLLVGFGSGM 733
N PM+ G LVG G+
Sbjct: 151 FNFYPMIVFGRFLVGLNCGI 170
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 545 SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNI---PMMYIGXLLV 715
S+ + G IG + SG+L D +GRR L+ + ++ PM+ +G L++
Sbjct: 104 SVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLII 163
Query: 716 GFGSG 730
G G
Sbjct: 164 GLNCG 168
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 545 SLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNI---PMMYIGXLLV 715
S+ + G IG + SG+L D +GRR L+ + ++ PM+ +G L++
Sbjct: 86 SVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLII 145
Query: 716 GFGSG 730
G G
Sbjct: 146 GLNCG 150
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 530 ASWIASLSSAGTPIGCILSGYLMDLIGRR 616
A+W+A++ G IG I G+L D GR+
Sbjct: 96 AAWVATIQFIGVLIGAITYGHLGDHFGRK 124
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +2
Query: 542 ASLSSAGTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLVGF 721
A + G IG I+ GY+ D IGR+ L +T +I YI L G
Sbjct: 112 AFVQYVGVLIGNIILGYVADQIGRKKTFILSMLIGIPSLSLSATFNSIAAFYIFRALTGI 171
Query: 722 G 724
G
Sbjct: 172 G 172
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 545 SLSSA---GTPIGCILSGYLMDLIGRRXXXXXXXXXXXXGWILISTSVNIPMMYIGXLLV 715
SLS+A GT +G I G+L D GRR +L + NI YI +L+
Sbjct: 117 SLSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILI 176
Query: 716 G 718
G
Sbjct: 177 G 177
>Z46828-1|CAA86856.1| 542|Caenorhabditis elegans Hypothetical
protein R03D7.2 protein.
Length = 542
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 230 MALHVLDTASSI--SSRMPKYGSMNESXPFIKNGVPATITKKVLIEKCKPGKEGR 388
+AL+VL + +++ SRM G M++ P+++ +PA + + + E +GR
Sbjct: 227 LALYVLGSLATMLPKSRMILVGDMHQLPPYMEEALPAELKRAAIGEPLTLAVKGR 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,514,269
Number of Sequences: 27780
Number of extensions: 433517
Number of successful extensions: 973
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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