Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_H03
(921 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 95 1e-20
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 94 2e-20
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 85 1e-17
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 82 9e-17
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 67 3e-12
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 95.1 bits (226), Expect = 1e-20
Identities = 60/195 (30%), Positives = 73/195 (37%)
Frame = +1
Query: 295 EXXPNXQGXXXPPFFFXXXXPXXXXXXXPKNQXXXXPXXXXFXXKLXFGLXFKXXXXQPX 474
E N QG P + KNQ P F K G F Q
Sbjct: 25 EIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSD 84
Query: 475 LXXXPFXVXXXGGXPKIXXPXXXXXKXFXPXXFIXXXXXKXKXXAXXFXGKXXQNAFFXV 654
+ PF V G P + K F P K + A + G +A V
Sbjct: 85 MKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTV 144
Query: 655 PXYXXXXQKQXPKNAGPXXGXXVXXIIXKPXXXGIVYGXXKKGXGKXNXXFFDLGGGXFK 834
P Y Q+Q K+AG G V II +P I YG + G+ N FDLGGG F
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFD 204
Query: 835 VFLLTXXDGXFEVKS 879
V LLT +G FEVK+
Sbjct: 205 VSLLTIEEGIFEVKA 219
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 94.3 bits (224), Expect = 2e-20
Identities = 61/195 (31%), Positives = 72/195 (36%)
Frame = +1
Query: 295 EXXPNXQGXXXPPFFFXXXXPXXXXXXXPKNQXXXXPXXXXFXXKLXFGLXFKXXXXQPX 474
E N QG P + KNQ P F K G F Q
Sbjct: 25 EIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSD 84
Query: 475 LXXXPFXVXXXGGXPKIXXPXXXXXKXFXPXXFIXXXXXKXKXXAXXFXGKXXQNAFFXV 654
+ PF V G P I K F P K + A F G +A V
Sbjct: 85 MKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTV 144
Query: 655 PXYXXXXQKQXPKNAGPXXGXXVXXIIXKPXXXGIVYGXXKKGXGKXNXXFFDLGGGXFK 834
P Y Q+Q K+AG G V II +P I YG + + N FDLGGG F
Sbjct: 145 PAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFD 204
Query: 835 VFLLTXXDGXFEVKS 879
V LLT +G FEVK+
Sbjct: 205 VSLLTIEEGIFEVKA 219
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 85.4 bits (202), Expect = 1e-17
Identities = 58/193 (30%), Positives = 66/193 (34%)
Frame = +1
Query: 295 EXXPNXQGXXXPPFFFXXXXPXXXXXXXPKNQXXXXPXXXXFXXKLXFGLXFKXXXXQPX 474
E PN QG P F KNQ P F K G ++ Q
Sbjct: 29 EIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKD 88
Query: 475 LXXXPFXVXXXGGXPKIXXPXXXXXKXFXPXXFIXXXXXKXKXXAXXFXGKXXQNAFFXV 654
+ PF V G P I K F K K + K + A V
Sbjct: 89 IKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITV 148
Query: 655 PXYXXXXQKQXPKNAGPXXGXXVXXIIXKPXXXGIVYGXXKKGXGKXNXXFFDLGGGXFK 834
P Y Q+ K+AG G V II +P I YG K N FDLGGG F
Sbjct: 149 PAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFD 208
Query: 835 VFLLTXXDGXFEV 873
V LL G FEV
Sbjct: 209 VSLLKIQGGVFEV 221
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 82.2 bits (194), Expect = 9e-17
Identities = 56/196 (28%), Positives = 70/196 (35%)
Frame = +1
Query: 286 GXXEXXPNXQGXXXPPFFFXXXXPXXXXXXXPKNQXXXXPXXXXFXXKLXFGLXFKXXXX 465
G E N QG P + KNQ P F K G F
Sbjct: 55 GRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTM 114
Query: 466 QPXLXXXPFXVXXXGGXPKIXXPXXXXXKXFXPXXFIXXXXXKXKXXAXXFXGKXXQNAF 645
+ PF + P + K F P K K A + GK +A
Sbjct: 115 AKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAV 174
Query: 646 FXVPXYXXXXQKQXPKNAGPXXGXXVXXIIXKPXXXGIVYGXXKKGXGKXNXXFFDLGGG 825
VP Y Q+Q K+AG G V I+ +P I YG K K + +DLGGG
Sbjct: 175 VTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDTEK-HIVVYDLGGG 233
Query: 826 XFKVFLLTXXDGXFEV 873
F V LL+ +G FEV
Sbjct: 234 TFDVSLLSIDNGVFEV 249
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 67.3 bits (157), Expect = 3e-12
Identities = 46/166 (27%), Positives = 62/166 (37%)
Frame = +1
Query: 382 KNQXXXXPXXXXFXXKLXFGLXFKXXXXQPXLXXXPFXVXXXGGXPKIXXPXXXXXKXFX 561
K Q P F K G FK Q + P+ + K +
Sbjct: 103 KRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLEARG---KTYS 159
Query: 562 PXXFIXXXXXKXKXXAXXFXGKXXQNAFFXVPXYXXXXQKQXPKNAGPXXGXXVXXIIXK 741
P K + A + GK +NA VP Y Q+Q K AG G V ++ +
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNE 219
Query: 742 PXXXGIVYGXXKKGXGKXNXXFFDLGGGXFKVFLLTXXDGXFEVKS 879
P + YG KK FDLGGG F + +L +G FEV+S
Sbjct: 220 PTAAALAYGLDKKNDA--IVAVFDLGGGTFDISILELNNGVFEVRS 263
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,389,997
Number of Sequences: 5004
Number of extensions: 10500
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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