Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_H01
         (912 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   2.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   9.7  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +2

Query: 230 RSLCRLKVEAMEVETKSTEIRCXMXXCSERGXCSWGRYXVILAEPVGVPVP 382
           R L  L    ++ + K+++ RC +  C E     +G Y  ++ + VG  +P
Sbjct: 305 RRLYILARSNLKRKIKASKRRCFLALCDEVENNPFGAYRTLMGKMVGQDLP 355


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 233 FETAELRPTITTDKPIINVELFATXTLTPIRRYSCYFKLNFKEIRGC 93
           FE + LR  + T     NV   +    TPI+RY+    LN +++  C
Sbjct: 176 FERSGLREEVMT-----NVRKSSYTKPTPIQRYAIPIILNGRDLMAC 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,626
Number of Sequences: 2352
Number of extensions: 7352
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)