Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_G24
         (991 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098985-4|AAC67422.2|  373|Caenorhabditis elegans Synaptotagmin...    34   0.18 
Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical pr...    31   0.96 
Z70205-11|CAD44096.1|  409|Caenorhabditis elegans Hypothetical p...    30   2.2  
Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    30   2.2  
Z68003-6|CAD44105.1|  409|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z54235-4|CAE17699.1|   95|Caenorhabditis elegans Hypothetical pr...    29   6.8  
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum...    28   8.9  

>AF098985-4|AAC67422.2|  373|Caenorhabditis elegans Synaptotagmin
           protein 6 protein.
          Length = 373

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +3

Query: 432 PEVV-PQLKVSKKPRTIPPKLKHRLNIPIEGSPTEVLENTIKEVISEYNHKFPGAFVMNK 608
           PEV+ P L V  + R + P LK RL+  I    T +++    EV+SE+  +   +    K
Sbjct: 54  PEVLAPTLTVDMESRKVQPSLKARLSQSINPWKTSIIDQLRPEVVSEFRGRINFSVAFEK 113

Query: 609 K 611
           +
Sbjct: 114 E 114


>Z83120-1|CAB05583.1|  837|Caenorhabditis elegans Hypothetical
           protein R06A4.2 protein.
          Length = 837

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 15/76 (19%), Positives = 34/76 (44%)
 Frame = +3

Query: 399 TFGCYRINARIPEVVPQLKVSKKPRTIPPKLKHRLNIPIEGSPTEVLENTIKEVISEYNH 578
           T G      ++PE +P+      P T+P   + +  +P++   ++  E  +   +S+   
Sbjct: 128 TCGSVSRKEKVPETIPETLEETVPETVPEPERLQNRMPLDVEISDSFEKAMWNHVSQNAA 187

Query: 579 KFPGAFVMNKKLGKSL 626
           +  G F+M ++    L
Sbjct: 188 RLTGKFLMTEQFWAEL 203


>Z70205-11|CAD44096.1|  409|Caenorhabditis elegans Hypothetical
           protein E02H4.3b protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 321 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 464
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 57  KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 105


>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 321 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 464
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 535 KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 583


>Z68003-6|CAD44105.1|  409|Caenorhabditis elegans Hypothetical
           protein E02H4.3b protein.
          Length = 409

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 321 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 464
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 57  KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 105


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 321 KEGRACYLKLSEILNPHTVVNRLNRATFG-CYRINARIPEVVPQLKVSK 464
           K+G   Y K   ILN  T+ + L   TFG   R+N  + +    LK+ K
Sbjct: 535 KDGHLIYSKGDFILNRFTIYDTLGEGTFGKVVRVNDSLSDTFMALKIIK 583


>Z54235-4|CAE17699.1|   95|Caenorhabditis elegans Hypothetical
           protein C09G9.8 protein.
          Length = 95

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 667 YVRGVGHYLXHSQYKLFPSFLFITN-APGNL*LYSDITSFIVFSRTSVGLP 518
           +V   G+ +  S Y++   FL I      ++ LYS+  +  ++ R+S GLP
Sbjct: 32  FVDEAGNIVDSSNYEILNGFLVIKKFTAADIGLYSEYPTKYIYGRSSNGLP 82


>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
            homolog protein 1 protein.
          Length = 1722

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 315  TSKEGRACYLKLSEILNPHTVVNRLNRATFGCYRINARIPEVVPQLKV 458
            T  EGR C   ++E  NP+  +N     T G Y+   R   + P+  V
Sbjct: 1548 TGFEGRNCTTDINECANPNNCINGECTNTLGNYKCACRNGFIGPRCSV 1595


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,604,504
Number of Sequences: 27780
Number of extensions: 327495
Number of successful extensions: 779
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)