Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G19
(942 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7) 50 3e-06
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15) 34 0.19
SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_56553| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.44
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 32 0.77
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 31 1.4
SB_22764| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 31 1.4
SB_6339| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 31 1.4
SB_49496| Best HMM Match : DUF81 (HMM E-Value=3.6) 31 1.4
SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_21539| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 4.1
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 5.5
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 5.5
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 5.5
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 29 5.5
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 29 7.2
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 9.5
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 9.5
>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
Length = 203
Score = 50.0 bits (114), Expect = 3e-06
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +2
Query: 413 ESAXXRGEAVXVLGALPXSRSLTRXXRXFGXGXRY 517
ESA RGEAV VLGALP RSLTR R FG G RY
Sbjct: 103 ESANARGEAVCVLGALPLPRSLTRCARSFGCGERY 137
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 50.0 bits (114), Expect = 3e-06
Identities = 25/35 (71%), Positives = 25/35 (71%)
Frame = +2
Query: 413 ESAXXRGEAVXVLGALPXSRSLTRXXRXFGXGXRY 517
ESA RGEAV VLGALP RSLTR R FG G RY
Sbjct: 467 ESANARGEAVCVLGALPLPRSLTRCARSFGCGERY 501
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 37.5 bits (83), Expect = 0.016
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = -2
Query: 461 EEXPIXKPPLPXXWPIHXMXXXPPTPPPXTXNXKMXAIVXAXXVTSRXXXGXKXTHSRSP 282
++ P PP P IH PP PPP + + A VTSR + SRSP
Sbjct: 207 DDLPPPPPPPPEDDSIHNHEDLPPPPPPK--ESRYTVMTSASTVTSRVSLSSTSSDSRSP 264
Query: 281 LXP 273
+ P
Sbjct: 265 MSP 267
>SB_59116| Best HMM Match : TPR_1 (HMM E-Value=6.7e-15)
Length = 884
Score = 33.9 bits (74), Expect = 0.19
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +1
Query: 418 GQXXGRGGLXIGXSSXFSLTDSXXSVVR 501
G G GGL IG SS SLTDS SVVR
Sbjct: 30 GTYTGGGGLRIGRSSASSLTDSLRSVVR 57
>SB_13469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2429
Score = 33.5 bits (73), Expect = 0.25
Identities = 22/52 (42%), Positives = 22/52 (42%)
Frame = +1
Query: 433 RGGLXIGXSSXFSLTDSXXSVVRXXXXVXLTQGGEXGYPRNXGXXPGKXXVG 588
RGGL IG SS SLTDS SVVR V G GK G
Sbjct: 262 RGGLRIGRSSASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNIPG 313
>SB_56553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +1
Query: 430 GRGGLXIGXSSXFSLTDSXXSVVR 501
G GGL IG SS SLTDS SVVR
Sbjct: 51 GPGGLRIGRSSASSLTDSLRSVVR 74
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPP 829
G PP P PGG PP +PPPP
Sbjct: 193 GMPPPPPPPPPPGFPGGAPPPPPPPFGAPPPP 224
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXP--PXXXXXKSPPPPP 826
PP P PGGG P P +PPPPP
Sbjct: 955 PPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Score = 30.3 bits (65), Expect = 2.4
Identities = 25/90 (27%), Positives = 28/90 (31%)
Frame = -1
Query: 882 PGGGXPPXXXXXKSPPPPPKGXXXGPGXXXXGXSXTXXPXXXXXPGXXPXIFXXPXXXSP 703
PGG PP PPPPP G P G + + P G P P +P
Sbjct: 915 PGGSVPP-------PPPPPGGNAPLPPPPPGGSAPSQPPPPG---GNAPPPPPPPGGSAP 964
Query: 702 TXXXXXPFXNXXSXGXQPXGKXPXXPPFSP 613
P G P P PP P
Sbjct: 965 PPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
GG PP P PGG PP PPPP G P
Sbjct: 949 GGNAPPPPP-----PPGGSAPPPGGGAPPLPPPPGGSAPPP 984
>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 448 GGLRIGRSSASSLTDSLRSVVR 469
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 575 GGLRIGRSSASSLTDSLRSVVR 596
>SB_22764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 7 GGLRIGRSSASSLTDSLRSVVR 28
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 2 GGLRIGRSSASSLTDSLRSVVR 23
>SB_6339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 2 GGLRIGRSSASSLTDSLRSVVR 23
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 309 GGLRIGRSSASSLTDSLRSVVR 330
>SB_49496| Best HMM Match : DUF81 (HMM E-Value=3.6)
Length = 302
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 254 GGLRIGRSSASSLTDSLRSVVR 275
>SB_49132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 140 GGLRIGRSSASSLTDSLRSVVR 161
>SB_21539| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1
Query: 436 GGLXIGXSSXFSLTDSXXSVVR 501
GGL IG SS SLTDS SVVR
Sbjct: 2 GGLRIGRSSASSLTDSLRSVVR 23
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/100 (24%), Positives = 27/100 (27%), Gaps = 3/100 (3%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP-GXXXXGXSXTXXPXXXXXPGXX 739
PP + P G PP PPPP P G G + P P
Sbjct: 2125 PPMGQYGAPARPAMGPPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPSGP 2184
Query: 738 PXIFXXPXXXSP--TXXXXXPFXNXXSXGXQPXGKXPXXP 625
P + P P T P G P G P
Sbjct: 2185 PPMGAPPSGPPPMGTPPSGHPPMGAPPMGPPPSGSHSPAP 2224
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
PP P P G P +PPPPP GP
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGP 374
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 876 GGXPPXXXXXKSPPPPPKGXXXGPGXXXXGXSXTXXP 766
GG PP + PPPP G GP G P
Sbjct: 577 GGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWGLPP 613
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 5.5
Identities = 28/128 (21%), Positives = 32/128 (25%)
Frame = -1
Query: 882 PGGGXPPXXXXXKSPPPPPKGXXXGPGXXXXGXSXTXXPXXXXXPGXXPXIFXXPXXXSP 703
P PP +PPPPP P P P P + P P
Sbjct: 266 PKNAPPPPKRGSSNPPPPP--TRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPP 323
Query: 702 TXXXXXPFXNXXSXGXQPXGKXPXXPPFSPXLAFXXPXAHXXFPXGXPXIPXITVFPPLS 523
+ P PP S A P P G P P PP
Sbjct: 324 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSG 383
Query: 522 EXYRSPXP 499
+ P P
Sbjct: 384 KINPPPPP 391
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXK--SPPPPPKG 820
GG PP P PGG PP +PPPPP G
Sbjct: 673 GGAPPPPPP----PLPGGAAPPPPPPIGGGAPPPPPPG 706
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.1 bits (62), Expect = 5.5
Identities = 28/128 (21%), Positives = 32/128 (25%)
Frame = -1
Query: 882 PGGGXPPXXXXXKSPPPPPKGXXXGPGXXXXGXSXTXXPXXXXXPGXXPXIFXXPXXXSP 703
P PP +PPPPP P P P P + P P
Sbjct: 178 PKNAPPPPKRGSSNPPPPP--TRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNATPPPPPP 235
Query: 702 TXXXXXPFXNXXSXGXQPXGKXPXXPPFSPXLAFXXPXAHXXFPXGXPXIPXITVFPPLS 523
+ P PP S A P P G P P PP
Sbjct: 236 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPGRRPPSG 295
Query: 522 EXYRSPXP 499
+ P P
Sbjct: 296 KINPPPPP 303
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKS-PPPPPKGXXXGPG 802
GG+ PP GGG PP + P PPP+G PG
Sbjct: 202 GGYAPPP----YVPQEGGGIPPQNHPLTNYPAPPPQGYAPPPG 240
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +1
Query: 439 GLXIGXSSXFSLTDSXXSVVR 501
GL IG SS SLTDS SVVR
Sbjct: 210 GLRIGRSSASSLTDSLRSVVR 230
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = +1
Query: 439 GLXIGXSSXFSLTDSXXSVVR 501
GL IG SS SLTDS SVVR
Sbjct: 70 GLRIGRSSASSLTDSLRSVVR 90
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 500 RTTEXXESVSEKXEEXPIXKPPLPXXWPIHXMXXXPPTPPP 378
RTT E EK ++ P PPLP PP PPP
Sbjct: 663 RTTTSQEQ--EKLKKVPPPPPPLPVIEGSSLSVPPPPPPPP 701
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 882 PGGGXPPXXXXXKSPPPPP 826
P GG PP PPPPP
Sbjct: 191 PSGGPPPPPPPPPPPPPPP 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,772,078
Number of Sequences: 59808
Number of extensions: 189587
Number of successful extensions: 993
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2752873431
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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