Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G19
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.097
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.097
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.097
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.68
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.68
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.68
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 25 2.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.8
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 29 3.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 4.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.097
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPP 826
G PP P P GG PP PPPPP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P G G PP SPPPP G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P P G PP SPPPPP G P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPAGGSPPP 291
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 934 AXRGXXXPXPXXGXXPXPRGGXPXXXXXXKKPPPXPKG 821
A G P P G P PR G P PPP G
Sbjct: 250 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
PP P P G PP SPPPP G P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 925 GXXXPXPXXGXXPXPRGGXPXXXXXXKKPPPXP 827
G P P P P GG P PPP P
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.097
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPP 826
G PP P P GG PP PPPPP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P G G PP SPPPP G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P P G PP SPPPPP G P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPAGGSPPP 312
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 934 AXRGXXXPXPXXGXXPXPRGGXPXXXXXXKKPPPXPKG 821
A G P P G P PR G P PPP G
Sbjct: 271 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
PP P P G PP SPPPP G P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 925 GXXXPXPXXGXXPXPRGGXPXXXXXXKKPPPXP 827
G P P P P GG P PPP P
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.097
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPP 826
G PP P P GG PP PPPPP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P G G PP SPPPP G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P P G PP SPPPPP G P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTG-SPPPPPAGGSPPP 297
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 934 AXRGXXXPXPXXGXXPXPRGGXPXXXXXXKKPPPXPKG 821
A G P P G P PR G P PPP G
Sbjct: 256 AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
PP P P G PP SPPPP G P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -3
Query: 925 GXXXPXPXXGXXPXPRGGXPXXXXXXKKPPPXP 827
G P P P P GG P PPP P
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 933 LXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPP 826
+ GG PP P GG PP PPPPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P GG PP PPPPP G P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 933 LXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKG 820
+ GG PP P P PP PPPPP G
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 933 LXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPP 826
+ GG PP P GG PP PPPPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P GG PP PPPPP G P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 933 LXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKG 820
+ GG PP P P PP PPPPP G
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.68
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 933 LXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPP 826
+ GG PP P GG PP PPPPP
Sbjct: 321 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
G PP P GG PP PPPPP G P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 933 LXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKG 820
+ GG PP P P PP PPPPP G
Sbjct: 337 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPG----GGXPPXXXXXKSPPPPP 826
GG PP P + P GG PP +PPPPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Frame = -1
Query: 924 GFXPPDPXWXXXXXPGGGX-----PPXXXXXKSPPPPPKG 820
G PP P G G PP +PPPPP G
Sbjct: 41 GTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTG 80
Score = 23.8 bits (49), Expect(2) = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 846 KSPPPPPKGXXXGP 805
+ PPPPPKG P
Sbjct: 94 RRPPPPPKGTGTPP 107
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
GG PP P PGG PP + PPPPP P
Sbjct: 805 GGPRPPYPY------PGGPVPPGPPQNRMPPPPPAQGAPSP 839
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGP 805
PP P P PP PPPPP G GP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = -1
Query: 882 PGGGXPPXXXXXKSPPPPPKGXXXGPG-XXXXGXSXTXXPXXXXXPG 745
PGG PP K PP PP G PG G P PG
Sbjct: 179 PGGDAPPGEAGPKGPPGPP-GSPGAPGEPGRPGDDAPSEPLIPGEPG 224
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 3.6
Identities = 37/140 (26%), Positives = 41/140 (29%), Gaps = 8/140 (5%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPP--PPKGXXXGPGXXXXGXSXTXXPXXXXXPGX 742
PP P P GG P +PP PP G P G
Sbjct: 406 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG 465
Query: 741 XPXIFXXPXXXSPTXXXXXPFXNXXSXGXQPXGKXPXXPPFSPXLAFXXPXAHXXF---- 574
P F P P+ PF G P G P PF+P A F
Sbjct: 466 PPGPF-NPSGAPPSGGPPGPF---DPSGAPPSGGPPG--PFNPSGAPPSGGPPGPFDPSG 519
Query: 573 --PXGXPXIPXITVFPPLSE 520
P G P +P T P SE
Sbjct: 520 APPSGMPPVPLPTDLPIPSE 539
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/102 (25%), Positives = 29/102 (28%), Gaps = 1/102 (0%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPP-PPKGXXXGPGXXXXGXSXTXXPXXXXXPGXX 739
PP P P GG P ++PP P G G G P
Sbjct: 181 PPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGG 240
Query: 738 PXIFXXPXXXSPTXXXXXPFXNXXSXGXQPXGKXPXXPPFSP 613
P P P+ PF G P G P PF P
Sbjct: 241 PPGPFDPSGAPPSGGPPGPF---NPSGAPPSGGPPG--PFDP 277
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/120 (26%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGPGXXXXGXSXTXXPXXXXXPGXXP 736
PP P P PP PPPPP G GP G P PG
Sbjct: 278 PPTPGMTPRPPP----PPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPPSRFGPPGMGG 332
Query: 735 XIFXXPXXXS-PTXXXXXPFXNXXSXGXQPXGKXPXXPPFSPXLAFXXPXAHXXFPXGXP 559
P P P S G G P PP P P H P P
Sbjct: 333 MPPPPPPGMRYPGGMPPPPPPRYPSAG---PGMYPPPPPSRPP---APPSGHGMIPPPPP 386
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 936 RLXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKG 820
R GG PP P PG PP PP PP G
Sbjct: 342 RYPGGMPPPPPPRYPSAGPGMYPPP---PPSRPPAPPSG 377
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/120 (26%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Frame = -1
Query: 915 PPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGPGXXXXGXSXTXXPXXXXXPGXXP 736
PP P P PP PPPPP G GP G P PG
Sbjct: 288 PPTPGMTPRPPP----PPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPPSRFGPPGMGG 342
Query: 735 XIFXXPXXXS-PTXXXXXPFXNXXSXGXQPXGKXPXXPPFSPXLAFXXPXAHXXFPXGXP 559
P P P S G G P PP P P H P P
Sbjct: 343 MPPPPPPGMRYPGGMPPPPPPRYPSAG---PGMYPPPPPSRPP---APPSGHGMIPPPPP 396
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 936 RLXGGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKG 820
R GG PP P PG PP PP PP G
Sbjct: 352 RYPGGMPPPPPPRYPSAGPGMYPPP---PPSRPPAPPSG 387
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 4.8
Identities = 26/102 (25%), Positives = 27/102 (26%), Gaps = 1/102 (0%)
Frame = -1
Query: 927 GGFXPPDPXWXXXXXPGGGXPPXXXXXKSPPPPPKGXXXGPG-XXXXGXSXTXXPXXXXX 751
GGF PP P P G P P P K GP G S P
Sbjct: 923 GGFIPPIPVPNPIPKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGP 982
Query: 750 PGXXPXIFXXPXXXSPTXXXXXPFXNXXSXGXQPXGKXPXXP 625
G P P P+ G P G P P
Sbjct: 983 NG--PSDPNKPSPNGPSDPVKPSPSGPSPNGPSPNGPSPNGP 1022
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,826,314
Number of Sequences: 27780
Number of extensions: 177968
Number of successful extensions: 948
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -