Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G16
(1089 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 27 3.2
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 27 3.3
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 27 3.3
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 27 3.3
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 27 3.3
BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear r... 25 5.3
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 25 5.3
BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein. 25 5.3
BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein. 25 5.3
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 27.1 bits (57), Expect(2) = 3.2
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 1047 GGGXXXXPPPPPPP 1006
G G PPPPPPP
Sbjct: 399 GAGGPPMPPPPPPP 412
Score = 23.8 bits (49), Expect(2) = 3.2
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = -1
Query: 1023 PPPPPPXXXXXXXGXGGXXXXXXXXXXXXXXXXXGGGGG 907
PPPPPP G G GGG G
Sbjct: 406 PPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRG 444
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 27.1 bits (57), Expect(2) = 3.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 1047 GGGXXXXPPPPPPP 1006
G G PPPPPPP
Sbjct: 387 GAGGPPMPPPPPPP 400
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = -1
Query: 1023 PPPPPPXXXXXXXGXGGXXXXXXXXXXXXXXXXXGGGGG 907
PPPPPP G G GGG G
Sbjct: 394 PPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRG 432
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 27.1 bits (57), Expect(2) = 3.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 1047 GGGXXXXPPPPPPP 1006
G G PPPPPPP
Sbjct: 387 GAGGPPMPPPPPPP 400
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = -1
Query: 1023 PPPPPPXXXXXXXGXGGXXXXXXXXXXXXXXXXXGGGGG 907
PPPPPP G G GGG G
Sbjct: 394 PPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRG 432
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 27.1 bits (57), Expect(2) = 3.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 1047 GGGXXXXPPPPPPP 1006
G G PPPPPPP
Sbjct: 387 GAGGPPMPPPPPPP 400
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = -1
Query: 1023 PPPPPPXXXXXXXGXGGXXXXXXXXXXXXXXXXXGGGGG 907
PPPPPP G G GGG G
Sbjct: 394 PPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRG 432
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 27.1 bits (57), Expect(2) = 3.3
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 1047 GGGXXXXPPPPPPP 1006
G G PPPPPPP
Sbjct: 387 GAGGPPMPPPPPPP 400
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = -1
Query: 1023 PPPPPPXXXXXXXGXGGXXXXXXXXXXXXXXXXXGGGGG 907
PPPPPP G G GGG G
Sbjct: 394 PPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRG 432
>BC002564-1|AAH02564.1| 856|Homo sapiens heterogeneous nuclear
ribonucleoprotein U-like 1 protein.
Length = 856
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 1026 PPPPPPPXXXXXXXGXGG 973
PPPPPPP GG
Sbjct: 774 PPPPPPPPPAYNYGSYGG 791
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 1041 GXXXXPPPPPPP 1006
G PPPPPPP
Sbjct: 770 GYTAPPPPPPPP 781
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated protein
protein.
Length = 856
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 1026 PPPPPPPXXXXXXXGXGG 973
PPPPPPP GG
Sbjct: 774 PPPPPPPPPAYNYGSYGG 791
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 1041 GXXXXPPPPPPP 1006
G PPPPPPP
Sbjct: 770 GYTGPPPPPPPP 781
>BC014232-1|AAH14232.1| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 1026 PPPPPPPXXXXXXXGXGG 973
PPPPPPP GG
Sbjct: 674 PPPPPPPPPAYNYGSYGG 691
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 1041 GXXXXPPPPPPP 1006
G PPPPPPP
Sbjct: 670 GYTAPPPPPPPP 681
>BC009988-1|AAH09988.2| 756|Homo sapiens HNRPUL1 protein protein.
Length = 756
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -1
Query: 1026 PPPPPPPXXXXXXXGXGG 973
PPPPPPP GG
Sbjct: 674 PPPPPPPPPAYNYGSYGG 691
Score = 24.6 bits (51), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 1041 GXXXXPPPPPPP 1006
G PPPPPPP
Sbjct: 670 GYTAPPPPPPPP 681
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,343,593
Number of Sequences: 237096
Number of extensions: 2893228
Number of successful extensions: 61468
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32124
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14981781346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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