Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_G15
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1071 - 8446761-8447440,8449334-8450489                           31   1.7  
02_02_0220 - 7992124-7992351,7992458-7992562,7993499-7993711,799...    29   5.2  

>01_01_1071 - 8446761-8447440,8449334-8450489
          Length = 611

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 302 HARNTYVFY*EHFEYNEKV*ARKCQLSIRCIATG-GHTVTHGARYKSI*ESTF 147
           H+R  YV Y +   Y E V  RK + +I  +  G G TV  G+R  +   +TF
Sbjct: 328 HSRRRYVIYVKRGVYEENVEVRKKKTNIVIVGEGMGETVITGSRSMAAGWTTF 380


>02_02_0220 -
           7992124-7992351,7992458-7992562,7993499-7993711,
           7993937-7994196,7994425-7994701,7995226-7995371,
           7995519-7995903,7996680-7996964
          Length = 632

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 714 CLTPASEPANSMSLGGNSSRSRRPSI 637
           CL P S+   +M LGGNS+ SR PS+
Sbjct: 169 CLPPRSK---TMVLGGNSTHSRHPSV 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,082,275
Number of Sequences: 37544
Number of extensions: 449836
Number of successful extensions: 1031
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)