Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G14
(837 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.007
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.016
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.022
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.022
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.066
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.12
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.35
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.62
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.5
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 4.4
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 7.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/61 (36%), Positives = 23/61 (37%)
Frame = +2
Query: 260 PPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPREX 439
PPPP +P P PPP PP PG PP PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP--PPPGVAGAGPPPPP--PPPPAVSA 787
Query: 440 G 442
G
Sbjct: 788 G 788
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/64 (40%), Positives = 26/64 (40%)
Frame = +1
Query: 373 PRXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXX 552
P TP P PPP P GGP P PP PPPG A PPPP P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAP----IMGGP--PPPP----PPPGVAGA-GPPPPPPPPPAV 785
Query: 553 XXGG 564
GG
Sbjct: 786 SAGG 789
Score = 36.3 bits (80), Expect = 0.005
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 257 PPPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPP 409
PPPPP P P P P PP G + PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 597 PPPXGGGXXPPPPXRGGGXKXKXPPPPPXXA 689
P P GG PPPP G PPPPP A
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 32.7 bits (71), Expect = 0.066
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +1
Query: 394 PPXXPX--XXPPPPPGXGXXXGGPXXPXPPKKXXPP--PGGXXAFXSPPP 531
PP P PPPPP G GP P PP PP G + +P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP----PPAVSAGGSRYYAPAP 797
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 199 PGPGVXXGPXXXXXLXXGGPPPPPXGXXXSPPKXPPP 309
P P P + PPPPP G + P PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 31.1 bits (67), Expect = 0.20
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 373 PRXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXP 540
P PP PPPPP G P PP GG + P P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 30.7 bits (66), Expect = 0.27
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 649 PPPRXGGGGXXPPPXGGGXVXPXXXPXXPPPXXXPXXXGGGGGXKXP 509
PPP GG PPP G P PPP P GG P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP---PAVSAGGSRYYAP 795
Score = 30.3 bits (65), Expect = 0.35
Identities = 25/73 (34%), Positives = 25/73 (34%)
Frame = +1
Query: 418 PPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGGXXX 597
PPPPP P P P PPP PPPP P G G
Sbjct: 733 PPPPPAVIVPTPAPA-PIP----VPPPAPIMGGPPPPPPPP-----------GVAGAGPP 776
Query: 598 PPPXGGGXXPPPP 636
PPP PPPP
Sbjct: 777 PPP------PPPP 783
Score = 29.9 bits (64), Expect = 0.47
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 522 PPPPPXXXGXXXGGGXXGXXXGXTXPPPXGGGXXPPPPXRGGGXKXKXPPPPP 680
PPPPP PP G PPPP G PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect = 0.62
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 5/42 (11%)
Frame = +1
Query: 199 PGPGVXXGPXXXXXLXXGGPPPPP-----XGXXXSPPKXPPP 309
P P P GGPPPPP G PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 258 PPPPXGXXXFSPXXXPPXXGGPPLXFXKXXPPXXXXGFPPGXGXHPPXXPXFXPPPPP 431
PPPP P PP PP G G PP PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP------PPPPP 783
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 490 PPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGGXXXPPPXGGGXXPPPP 636
PPP P P P+ G P G G PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 196 PPGPGVXXGPXXXXXLXXGGPPPPPXGXXXSPPKXPPPXGXAPP 327
PP P P PP P G PP P G PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 25.8 bits (54), Expect = 7.6
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 520 SPPPPXPLXXXXXGGXXXGXXGGXXXPPPXGG--GXXPPPPXGGXXXXQKXPPP 675
SPPPP P PPP G PPPP G PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAP-----IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 7.6
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = +3
Query: 372 PPGXGXHPPXXPXFXPPPPPGKXXXXGGXPXXXXXXXXXXXXRGXXGXXFPPPPPXXXGX 551
PP P P P PPP GG P G G PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIM--GGPPPPPPPP-------GVAGAGPPPPPPPPPAV 785
Query: 552 XXGGGXXGXXXGXTXPPP 605
GG P P
Sbjct: 786 SAGGSRYYAPAPQAEPEP 803
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.5 bits (88), Expect = 6e-04
Identities = 40/157 (25%), Positives = 42/157 (26%), Gaps = 9/157 (5%)
Frame = +1
Query: 256 PPPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFP---RXXXXTPPXXPXXXPP- 423
PPPPP PP APP + P G P PP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 424 -----PPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGG 588
PP G P P PP PP S PP P+ G
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPS--LPPSAPPSLPPSAPPSLPM-------------GA 443
Query: 589 XXXPPPXGGGXXPPPPXGGXXXXQKXPPPXXXXPNRP 699
PP PP G PP P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 39.1 bits (87), Expect = 8e-04
Identities = 40/162 (24%), Positives = 44/162 (27%), Gaps = 2/162 (1%)
Frame = +1
Query: 196 PPGPGVXXGPXXXXXLXXGGPPP--PPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXX 369
PP P L PPP PP S P PP AP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 370 FPRXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXX 549
P + PPP P P + PP G + S PPP P
Sbjct: 293 PPPSSRVSAAALAANKKRPPP--------PPPPSRRNRGKPPIGNGSSNSSLPPPPP--- 341
Query: 550 XXXGGXXXGXXGGXXXPPPXGGGXXPPPPXGGXXXXQKXPPP 675
G PP G PPPP + PPP
Sbjct: 342 -----PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 36.3 bits (80), Expect = 0.005
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 257 PPPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPP 430
P PP LP PP P P P PP PP P PPP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 35.9 bits (79), Expect = 0.007
Identities = 36/142 (25%), Positives = 38/142 (26%), Gaps = 4/142 (2%)
Frame = +3
Query: 261 PPPXGXXXFSPXXXPPXXGGP----PLXFXKXXPPXXXXGFPPGXGXHPPXXPXFXPPPP 428
PPP SP PP P P PP PPPP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 429 PGKXXXXGGXPXXXXXXXXXXXXRGXXGXXFPPPPPXXXGXXXGGGXXGXXXGXTXPPPX 608
P + G P G PPPPP G PP
Sbjct: 317 PSRRNR--GKPPIG---------NGSSNSSLPPPPPPPRSNAAGS---------IPLPPQ 356
Query: 609 GGGXXPPPPXRGGGXKXKXPPP 674
G PPPP R + PPP
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPP 378
Score = 35.1 bits (77), Expect = 0.012
Identities = 23/96 (23%), Positives = 24/96 (25%)
Frame = +1
Query: 406 PXXXPPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXG 585
P P PPP G P P P + PP P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 586 GXXXPPPXGGGXXPPPPXGGXXXXQKXPPPXXXXPN 693
PPP PP G PPP N
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN 346
Score = 35.1 bits (77), Expect = 0.012
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +2
Query: 257 PPPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPRE 436
PPPPP + P G PP + G PP PPPPPR
Sbjct: 313 PPPPPSRRN----RGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 437 XGXXGGXP 460
G P
Sbjct: 369 APSTGRQP 376
Score = 32.3 bits (70), Expect = 0.088
Identities = 24/90 (26%), Positives = 26/90 (28%)
Frame = +1
Query: 256 PPPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXXPXXXPPPPPG 435
P PP G P P + P P P PP P P PP
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS-APIAPPL 459
Query: 436 XGXXXGGPXXPXPPKKXXPPPGGXXAFXSP 525
P P PP PPP A +P
Sbjct: 460 PAGMPAAP--PLPPAAPAPPPAPAPAPAAP 487
Score = 31.5 bits (68), Expect = 0.15
Identities = 26/122 (21%), Positives = 26/122 (21%)
Frame = +3
Query: 315 GGPPLXFXKXXPPXXXXGFPPGXGXHPPXXPXFXPPPPPGKXXXXGGXPXXXXXXXXXXX 494
G P PP PP P PP PP P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPPERV--PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVS 279
Query: 495 XRGXXGXXFPPPPPXXXGXXXGGGXXGXXXGXTXPPPXGGGXXPPPPXRGGGXKXKXPPP 674
PP P PPP PP G PPP
Sbjct: 280 MNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
Query: 675 PP 680
PP
Sbjct: 340 PP 341
Score = 31.5 bits (68), Expect = 0.15
Identities = 36/134 (26%), Positives = 37/134 (27%), Gaps = 19/134 (14%)
Frame = +1
Query: 196 PPGPGVXXGPXXXXXLXXGGPPPPPXGXXXSPPKXPPPXG--------XAPP-----XXX 336
PP G PPPPP S + PPP APP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Query: 337 XKXXPXXGFXXFPRXXXXTPPXXPXXXPPP-PPG--XGXXXGGP-XXPXPPKKXXPP--P 498
P TPP P PP PP G P P PP P P
Sbjct: 401 PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Query: 499 GGXXAFXSPPPPXP 540
G A PP P
Sbjct: 461 AGMPAAPPLPPAAP 474
Score = 29.9 bits (64), Expect = 0.47
Identities = 24/88 (27%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = +1
Query: 418 PPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGGXXX 597
PPPPP G P + PPP A + P PL
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSR-------AVSNPPA 390
Query: 598 PPPXGGGXXPP--PPXGGXXXXQKXPPP 675
PPP G P PP G P P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVP 418
Score = 29.1 bits (62), Expect = 0.82
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +3
Query: 522 PPPPPXXXGXXXGGGXXGXXXGXTXPPPXGGGXXPPPPXRGGGXKXKXPPPPP 680
PP PP PPP PP G PPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 27.9 bits (59), Expect = 1.9
Identities = 30/151 (19%), Positives = 32/151 (21%)
Frame = +2
Query: 314 GXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPREXGXXGGXPXXXXXXXXXXX 493
G P PP P P P PP PP G P
Sbjct: 222 GTPTSTSAPPIPPSIPSSRPP--ERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVS 279
Query: 494 XXGGXRXFXPPPPPXXSXXXXXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXPPP 673
PP P S PPP
Sbjct: 280 MNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
Query: 674 PXXXXPTDRXXXXGGGGXPPKKKXXXTPPPP 766
P P R G PP+ + PPPP
Sbjct: 340 P----PPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 724 PPPPXXXXXVCWAXLXXXXXXFXXXPPPRXGGGGXXPPPXGGGXVXPXXXPXXPPP 557
PP P V A L PPP G PP G G P PPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK--PPIGNGSSNSSLPPPPPPP 343
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.9 bits (79), Expect = 0.007
Identities = 27/71 (38%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Frame = -1
Query: 459 GXPPXXPXSRGGGGGXXG-GXGGGVXXXPGEXPKXXXGGXFXXXXGGGXPXXGGXFXGRX 283
G PP P GG GG G G G G P GG GGG GG G
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP--GGFGGGPGGFGGGLGG-F 254
Query: 282 XXXPGGGGGXP 250
PGG GG P
Sbjct: 255 GGGPGGFGGGP 265
Score = 33.5 bits (73), Expect = 0.038
Identities = 25/70 (35%), Positives = 25/70 (35%)
Frame = -3
Query: 460 GXPPXXXXFPGGGGGXXXGXXGGCXPXPGGXPXXXXGGXXFXXXRGGPPXXGGXFXGEKX 281
G PP F G GG G G GG P GG GGP GG G
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP--GGFGGGPGGFGGGLGG-FG 255
Query: 280 XXPXGGGGXP 251
P G GG P
Sbjct: 256 GGPGGFGGGP 265
Score = 33.1 bits (72), Expect = 0.050
Identities = 23/60 (38%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -1
Query: 432 RGGGGGXXGGXGGGVXXXPGEXPKXXXGGXFXXXXGGGXPXXG-GXFXGRXXXXPGGGGG 256
RG GG GG GGG P P G F G G G G F G GG GG
Sbjct: 183 RGHNGGGFGGFGGGSGGPP---PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Score = 33.1 bits (72), Expect = 0.050
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = -1
Query: 429 GGGGGXXGGXGGGVXXXPGEXPKXXXGGXFXXXXGGGXPXXGGXFXGRXXXXPGGGGGXP 250
GGG G GG GG PG G GG GG G PGG GG P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP--GGFEGGPGGFGGGP 244
Score = 30.3 bits (65), Expect = 0.35
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = -3
Query: 430 GGGGGXXXGXXGGCXPXPGGXPXXXXGGXXFXXXRGGPPXXGGXFXGEKXXXPXGGGGXP 251
GGG G G GG P PGG G GG GG G P G GG P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGE-GHHHGGHGGFGGG-PGGFEGGPGGFGGGP 244
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = -3
Query: 430 GGGGGXXXGXXGGCXPXPGGXPXXXXG-GXXFXXXRGGPPXXGG 302
GGG G G GG PGG G G GGP GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.016
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = +1
Query: 196 PPGPGVXXGPXXXXXLXXGGPPPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFP 375
PP P P PPP P P K PP PP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA-PVKSPPSAP 188
Query: 376 RXXXXTPPXXPXXXPPP 426
PP P PPP
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
Score = 32.7 bits (71), Expect = 0.066
Identities = 21/80 (26%), Positives = 21/80 (26%)
Frame = +1
Query: 256 PPPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXXPXXXPPPPPG 435
P PP PP PP PP P P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS--KAPPIPSSLPPPAQPAAPVKSPP 185
Query: 436 XGXXXGGPXXPXPPKKXXPP 495
P PPK PP
Sbjct: 186 SAPSLPSAVPPMPPKVPPPP 205
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +1
Query: 304 PPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPPKK 483
PP APP + P P PP P PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSI----PPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Query: 484 XXPPPGGXXAFXSPPPPXP 540
P + S PP P
Sbjct: 180 PVKSPPSAPSLPSAVPPMP 198
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 260 PPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPP 430
PP P P PP PPP PP P PPP P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPA-SAPPIPSKA-PPIPSSLPPPAQPAAPVKSP 184
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.022
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 373 PRXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXP 540
P TPP P PP P PP P P G + +PPPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS--APPPPLP 1736
Score = 30.7 bits (66), Expect = 0.27
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +2
Query: 314 GXPPPXXXKXXPPXXXXGXSPGXXXTP-PPXPPXXPPPPPREXGXXGGXP 460
G P PP +P P PP PP PPPP G P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/49 (30%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Frame = +2
Query: 290 PXKXPPXX--GXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPP 430
P PP PP PP P P P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 256 PPPPPXGXXXSPPKXPPPXGXAPP 327
P PPP PP PP PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPP 1728
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.022
Identities = 27/101 (26%), Positives = 28/101 (27%)
Frame = +1
Query: 196 PPGPGVXXGPXXXXXLXXGGPPPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFP 375
PP P P P P P P P P PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGI---PPVPKPAAGVPPVPPPSEAPPV-----P 1201
Query: 376 RXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPPKKXXPPP 498
+ PP P PP P G P P P K P P
Sbjct: 1202 KPSVGVPPVPPPSTAPPVPTPS--AGLPPVPVPTAKAPPVP 1240
Score = 33.1 bits (72), Expect = 0.050
Identities = 34/133 (25%), Positives = 35/133 (26%), Gaps = 7/133 (5%)
Frame = +1
Query: 256 PPPPPXGXXXSPPKXPPPXGXAP------PXXXXKXXPXXGFXXFPRXXXXTPP-XXPXX 414
PPP P S P PP P P P P+ PP P
Sbjct: 970 PPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSA 1029
Query: 415 XPPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGGXX 594
PP P P P P P P S PPP P G
Sbjct: 1030 DAPPIP---VPSTAPPVPI-PTSTPPVPKSSSGAPSAPPPVPAPSSEIPS-IPAPSGAPP 1084
Query: 595 XPPPXGGGXXPPP 633
P P G P P
Sbjct: 1085 VPAPSGIPPVPKP 1097
Score = 32.3 bits (70), Expect = 0.088
Identities = 30/96 (31%), Positives = 31/96 (32%)
Frame = +1
Query: 253 GPPPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXXPXXXPPPPP 432
G PP P +PP P P G APP P P P P PP P
Sbjct: 1119 GAPPVPKPSVAAPP-VPVPSG-APPVPK----PSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 433 GXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXP 540
G P P P P P A PP P P
Sbjct: 1173 APS--SGIPPVPKPAAGVPPVPPPSEA---PPVPKP 1203
Score = 31.5 bits (68), Expect = 0.15
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 260 PPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPREX 439
PP P +P P G PP PP P P P P PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV----PKPSVGVPPVPPPSTAPPVPTPSA 1224
Query: 440 G 442
G
Sbjct: 1225 G 1225
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 257 PPPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPRE 436
PPP P +P P G PP PP P P P P PP P
Sbjct: 1063 PPPVPAPSSEIP-SIPAPSGAPPVPAPSGIPPV----PKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 437 XG 442
G
Sbjct: 1118 SG 1119
Score = 29.9 bits (64), Expect = 0.47
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +2
Query: 251 GXPPPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPP 430
G PP PP P P G PP PP +P P P P PP P
Sbjct: 1187 GVPPVPPPSEA--PPVPKPSVGVPPVPPPSTAPPV----PTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 1.1
Identities = 34/152 (22%), Positives = 34/152 (22%), Gaps = 9/152 (5%)
Frame = +1
Query: 262 PPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXXPXXXPPPPPGXG 441
PP P PPP AP G P P P PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPV-PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Query: 442 -------XXXGGPXXPXP--PKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGGXX 594
G P P P P P G P P G
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 595 XPPPXGGGXXPPPPXGGXXXXQKXPPPXXXXP 690
P P PP P PPP P
Sbjct: 1169 PPVPAPSSGIPPVPKPA-AGVPPVPPPSEAPP 1199
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = +2
Query: 260 PPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPREX 439
PP P +P P P P PP +P P P P PP P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP-----PVPKPSVAAPPVPAPS 1156
Query: 440 G 442
G
Sbjct: 1157 G 1157
Score = 27.1 bits (57), Expect = 3.3
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +2
Query: 260 PPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPPPREX 439
PP P P P P P PP +P P P P PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP-----PVPKPSVAAPPVPVPS 1137
Query: 440 G 442
G
Sbjct: 1138 G 1138
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +2
Query: 260 PPPPGXXXFLPXKXPPXXGXPPPXXXKXXPPXXXXGXSPGXXXTPPPXPPXXPPPP 427
PP P P P PP PP P P P P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV----PKPSVAAPPVPVPSGAPPVP 1143
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.066
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 241 LXXGGPPPPPXGXXXSPPKXPPP 309
L G PPPPP PP PPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPP 26
Score = 30.7 bits (66), Expect = 0.27
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 348 PPXXXXGFPPGXGXHPPXXPXFXPPPPPG 434
PP PP G PP P PPPPPG
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP--PPPPPG 31
Score = 30.3 bits (65), Expect = 0.35
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 251 GXPPPPPGXXXFLPXKXPPXXGXPPPXXXK 340
G PPPPP F P PP PPP K
Sbjct: 7 GNPPPPPPPPGFEPPSQPPP--PPPPGYVK 34
Score = 29.5 bits (63), Expect = 0.62
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 600 PPXGGGXXPPPPXRGGGXKXKXPPPPP 680
PP G PPPP G + PPPPP
Sbjct: 5 PP--GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.1 bits (62), Expect = 0.82
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 256 PPPPPXGXXXSPPKXPPPXG 315
PPPPP S P PPP G
Sbjct: 12 PPPPPGFEPPSQPPPPPPPG 31
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 406 PXXXPPPPPGXGXXXGGPXXPXPPKKXXPPPG 501
P PPPPP G P P PP PPPG
Sbjct: 6 PGNPPPPPPPPGFEP--PSQPPPP----PPPG 31
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 466 PXPPKKXXPPPGGXXAFXSPPPPXP 540
P P PPPG PPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Frame = +2
Query: 374 PGXXXTPPPXP---PXXPPPPPREXG 442
PG PPP P P PPPP G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = -1
Query: 441 PXSRGGGGGXXGGXGGGVXXXPGEXPKXXXGGXFXXXXGGGXPXXGGXFXG 289
P RGG GG GG GG G GG GG G F G
Sbjct: 134 PAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRG 184
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = -1
Query: 435 SRGG-GGGXXGGXGGGVXXXPGEXPKXXXGGXFXXXXGGG 319
SRGG GG GG GGG G + G F GG
Sbjct: 150 SRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.35
Identities = 39/149 (26%), Positives = 40/149 (26%), Gaps = 5/149 (3%)
Frame = +1
Query: 259 PPPPXGXXXSPPKXPPPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXX--PXXXPPPPP 432
PPPP PPP P + P P PP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEP----GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 433 GXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXGXXGGXXXPPPXG 612
G P PP P PPPP G PPP
Sbjct: 264 MHHEP--GEHMPPPPMHHEPGE------HMPPPPM-----------HHEPGEHMPPPPMH 304
Query: 613 ---GGXXPPPPXGGXXXXQKXPPPXXXXP 690
G PPPP PPP P
Sbjct: 305 HEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Score = 27.5 bits (58), Expect = 2.5
Identities = 27/101 (26%), Positives = 29/101 (28%), Gaps = 6/101 (5%)
Frame = +1
Query: 406 PXXXPPPPP---GXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPPPXPLXXXXXGGXXXG 576
P PPPP G P P + PPP PP P+
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP------- 255
Query: 577 XXGGXXXPPPXG---GGXXPPPPXGGXXXXQKXPPPXXXXP 690
G PPP G PPPP PPP P
Sbjct: 256 --GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.62
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +1
Query: 418 PPPPPGXGXXXGGPXXPXPPKKXXP--PPGGXXAF-XSPPPPXPL 543
PPPPP GP P P PP G A +P P P+
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPV 1926
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -1
Query: 450 PXXPXSRGGGGGXXGGXGGGVXXXPGEXPKXXXGGXFXXXXGGGXPXXGGXFXGRXXXXP 271
P RGG G GG GG G GG GG GG GR
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGG--RGGARGGRGGRGGARGGRGGSSG 62
Query: 270 GGGG 259
G GG
Sbjct: 63 GRGG 66
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 2/73 (2%)
Frame = +1
Query: 304 PPXGXAPPXXXXKXXPXXGFXXFPRXXXXTPPXXPXXXPPPPPGXGXXXGGPXXPXPP-- 477
PP APP P G P PP P PP G P P P
Sbjct: 494 PPTTFAPPGVPLPPIP--GAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGI 551
Query: 478 KKXXPPPGGXXAF 516
PPG ++
Sbjct: 552 PGATAPPGAPGSY 564
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.6 bits (56), Expect = 4.4
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 259 PPPPXGXXXSPPKXPPP 309
PPPP +PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/38 (28%), Positives = 13/38 (34%)
Frame = +1
Query: 418 PPPPPGXGXXXGGPXXPXPPKKXXPPPGGXXAFXSPPP 531
PPP PP+ PPP +PPP
Sbjct: 9 PPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPP 46
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 649 PPPRXGGGGXXPPPXGGGXVXPXXXPXXPPP 557
PPP G PP G V P P P P
Sbjct: 926 PPPPKVGETYHPPTASGTRVPPVQQPSHPNP 956
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.157 0.580
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,299,218
Number of Sequences: 5004
Number of extensions: 52535
Number of successful extensions: 460
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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