Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G11
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 119 3e-27
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 119 3e-27
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 101 6e-22
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 90 2e-18
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 80 2e-15
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 75 7e-14
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 72 5e-13
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 67 2e-11
10_01_0065 + 845447-846187,846969-847193 66 3e-11
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 66 4e-11
10_01_0066 + 848523-849269,849520-849741 65 6e-11
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 65 8e-11
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 64 2e-10
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 58 1e-08
04_01_0350 - 4610444-4610668,4612181-4612969 56 4e-08
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 36 0.042
05_05_0123 - 22553400-22554509 29 6.3
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 119 bits (286), Expect = 3e-27
Identities = 51/92 (55%), Positives = 68/92 (73%)
Frame = +2
Query: 158 TDARVPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI 337
T A++P +GLGTW+++PG V AV A+ GYRH+DCA Y NEKE+G AL+ F+EG +
Sbjct: 9 TGAKIPSVGLGTWQAEPGVVGNAVYAAVKAGYRHIDCAQAYFNEKEIGVALKKVFDEGIV 68
Query: 338 KREDIFITSKLWCTFHRPDLVEEAIKXSXKNL 433
KREDIFITSKLWCT H P+ V A+ + ++L
Sbjct: 69 KREDIFITSKLWCTNHAPEDVPVALDSTLQDL 100
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 119 bits (286), Expect = 3e-27
Identities = 53/97 (54%), Positives = 68/97 (70%)
Frame = +2
Query: 158 TDARVPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI 337
T A++P +GLGTW+S PG V AV A+ GYRH+DCA +Y NE EVG AL+ FEEG +
Sbjct: 9 TGAKIPSVGLGTWQSDPGVVGDAVYAAVKAGYRHIDCARMYKNENEVGIALKKLFEEGVV 68
Query: 338 KREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGLGVL 448
KRED+FITSKLWC H P+ V E++ + +L L L
Sbjct: 69 KREDLFITSKLWCDCHAPEDVPESLDKTLSDLQLEYL 105
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 441 EYLDLYLIHW 470
EYLDLYLIHW
Sbjct: 103 EYLDLYLIHW 112
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 101 bits (243), Expect = 6e-22
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 TDARVPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEV-GDALRAKFEEGT 334
T AR+P +GLGT+K+ G V V A+ GYRH+DCA +Y NE+EV G AL+ F++G
Sbjct: 9 TGARIPSVGLGTYKAGTGVVADVVSAAVKAGYRHIDCAPLYKNEQEVIGGALKKLFDDGV 68
Query: 335 IKREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
+KRED+FITSK+WC+ P+ V A+ + K+L L
Sbjct: 69 VKREDLFITSKIWCSDLAPEDVPLAMDSTLKDLQL 103
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 90.2 bits (214), Expect = 2e-18
Identities = 45/93 (48%), Positives = 56/93 (60%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P +GLG W+ + + A+ IGYRH DCA Y NE EVGDAL F+ G +KRED
Sbjct: 21 MPSVGLGVWRMDSPAIRDLIHSALRIGYRHFDCAADYQNEAEVGDALAEAFQTGLVKRED 80
Query: 350 IFITSKLWCTFHRPDLVEEAIKXSXKNLGLGVL 448
+FIT+KLW + H V EA K S K L L L
Sbjct: 81 LFITTKLWNSDH--GHVVEACKDSLKKLRLDYL 111
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 80.2 bits (189), Expect = 2e-15
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +2
Query: 158 TDARVPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI 337
T A++P +GLGTW+S PG V AV A+ GYRH+DCA Y NEKEVG AL+ FEE +
Sbjct: 9 TGAKIPSVGLGTWQSDPGVVGNAVYAAVKAGYRHIDCASAYNNEKEVGLALKKLFEEVEL 68
Query: 338 KREDIF-----ITSKLWCTFHRPDLVEEAIKXSXKNLGLGVL 448
+ + + + C H P+ V EA+ + +L L L
Sbjct: 69 EFQCLLGALLQLIRGDGCDHHAPEDVPEALDATLNDLQLEYL 110
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3
Query: 441 EYLDLYLIHW 470
EYLDLYLIHW
Sbjct: 108 EYLDLYLIHW 117
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/92 (41%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
Frame = +2
Query: 170 VPXIGLGTWKSKP-GEVT--QAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIK 340
VP +GLGT + GE + A+ A+++GYRH+D A +Y +E+ VG+A+ G I
Sbjct: 28 VPAVGLGTASLRSVGEESFRGALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRGVIA 87
Query: 341 -REDIFITSKLWCTFHRPDLVEEAIKXSXKNL 433
RE++F+T+K+WCT PDLV +++ S +NL
Sbjct: 88 CREEVFVTTKVWCTQCHPDLVLPSLRESLQNL 119
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 72.1 bits (169), Expect = 5e-13
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +2
Query: 161 DAR-VPXIGLGT--WKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEG 331
DAR +P +G+G + S P AV A++ G+RH D A +Y E +G+A+ G
Sbjct: 14 DARPMPAVGMGVAEYPSTPERTRDAVLAALEAGFRHFDTASLYRTEAPLGEAIAEATRRG 73
Query: 332 TI-KREDIFITSKLWCTFHRPDLVEEAIKXSXKNL 433
+ RE+ F+T+KLWCT PDLV +++ S +NL
Sbjct: 74 LLASREEAFVTTKLWCTQCHPDLVLPSLRESLRNL 108
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 66.9 bits (156), Expect = 2e-11
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +2
Query: 239 IDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKREDIFITSKLWCTFHRPDLVEEAIKX 418
+ GYRHVD A Y E+EVG L+A E G I R+D+F+TSK+WCT P+ V A+K
Sbjct: 89 LQAGYRHVDTAAQYGIEQEVGKGLKAAMEAG-INRKDLFVTSKIWCTNLAPERVRPALKN 147
Query: 419 SXKNLGL 439
+ K+L L
Sbjct: 148 TLKDLQL 154
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 66.5 bits (155), Expect = 3e-11
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = +2
Query: 170 VPXIGLGTWK---SKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI- 337
+P +G+GT + + T A+ AI++GYRH D A IY E VG+A+ G I
Sbjct: 16 MPRVGMGTAAFPFTSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIA 75
Query: 338 KREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
R D+F+TSK+WC+ V A + + +NLG+
Sbjct: 76 SRADVFVTSKIWCSDLHAGRVVPAARETLRNLGM 109
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Frame = +2
Query: 170 VPXIGLGTWKS---KPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI- 337
+P +G+GT S P A A+++G+RH D A +Y E +G+A+ G +
Sbjct: 17 MPAVGVGTADSAATSPETKRGAALAALEVGFRHFDTAALYGTEAPLGEAIAEATRRGLVA 76
Query: 338 KREDIFITSKLWCTFHRPDLVEEAIKXSXKNL 433
RE++F+T+KLWCT P LV +++ S +NL
Sbjct: 77 SREEVFVTTKLWCTQCHPGLVLPSLRESLRNL 108
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Frame = +2
Query: 170 VPXIGLGTWK---SKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI- 337
+P IG+GT + E T A+ AI++GYRH D A +Y E V +A+ G +
Sbjct: 18 MPRIGMGTAAFPFTSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVA 77
Query: 338 KREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
R D+F+TSKLWC+ V A + + +NLG+
Sbjct: 78 SRADVFVTSKLWCSDLHAGRVVPAARETLRNLGM 111
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 64.9 bits (151), Expect = 8e-11
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +2
Query: 170 VPXIGLGTWKS--KPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI-K 340
+P +G+GT +P + +AV AI+ GYRH D A Y E +G+A G I
Sbjct: 15 MPRVGMGTAVQGPRPEPIRRAVLKAIEAGYRHFDTAAHYETEAPIGEAAAEAVRSGAIAS 74
Query: 341 REDIFITSKLWCTFHRPDLVEEAIKXSXKNL 433
R D+FITSKLWC+ D V A++ + NL
Sbjct: 75 RADLFITSKLWCSDAHRDRVLPALRQTLWNL 105
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 402 RKLSRXRXRTW--VWEYLDLYLIHWAPGLQGXRRPVP 506
R L R W EY+DLYL+HW ++ R P
Sbjct: 93 RVLPALRQTLWNLQMEYVDLYLVHWPVSMKPGRYKAP 129
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Frame = +2
Query: 116 ASSMAAPXPRSYSTTDARVPXIGLGTWK------SKPGEVTQAVKDAIDIGYRHVDCAHI 277
+++ AA P + + +P +G+GT P V AV AID GYRH D A
Sbjct: 9 SAAAAATIPEAALRSGKPMPLVGMGTASFPLDAPQLPATVRDAVLRAIDAGYRHFDTAAA 68
Query: 278 YLNEKEVGDALRAKFEEGTI-KREDIFITSKLWCTFHRPDLVEEAIKXSXKNL 433
Y E +G+A+ G + R+D++ITSKLW + P V A++ + +NL
Sbjct: 69 YGTEAPLGEAVLEAVRAGMVASRDDLYITSKLWISDTHPGRVLPALRRTLRNL 121
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = +2
Query: 140 PRSYSTTDARVPXIGLGTWK-----SKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGD 304
P + ++ +P +G+GT + P V V AI+ GYRH D A +Y E +GD
Sbjct: 2 PEAALSSGKPMPRVGMGTASFPLGATDPSTVKDVVLRAIEAGYRHFDTAAVYQTEAILGD 61
Query: 305 ALRAKFEEGTI-KREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGLGVL 448
A+ G + R++++ITSKLW P V +++ + + + + L
Sbjct: 62 AVAEAVRAGLVASRDELYITSKLWVAHAHPGHVLPSLRRALRKMQMEYL 110
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 56.0 bits (129), Expect = 4e-08
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +2
Query: 170 VPXIGLGTWKSKP-GEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTI-KR 343
+P +G GT S P ++ + A+ +GYRH+D A +Y E VG A+ G + R
Sbjct: 31 MPVLGFGTGSSTPPADLAATIAHAVRLGYRHLDTAAVYGTEGAVGAAVAEAVRCGAVASR 90
Query: 344 EDIFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
++F+T+KL P V A++ S LGL
Sbjct: 91 GELFVTTKLSMADAHPPRVVAALRESLSRLGL 122
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 35.9 bits (79), Expect = 0.042
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2
Query: 245 IGYRHVDCAHIYLNEKEVGDALRAK 319
+GYRH+DC+ Y N+KEV +RAK
Sbjct: 35 VGYRHIDCSPQYGNQKEVHGPVRAK 59
>05_05_0123 - 22553400-22554509
Length = 369
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 584 SNRAXXAPQGSX*SPXDGMXLSSESFGNRSSPSLK 480
SN+ APQ S S + SSES G ++P+L+
Sbjct: 270 SNKTSPAPQSSSCSSSSSVRTSSESDGGAAAPALR 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,342,667
Number of Sequences: 37544
Number of extensions: 384842
Number of successful extensions: 982
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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