Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_G11
         (860 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    28   0.42 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   1.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   6.8  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   6.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   9.0  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = -3

Query: 513 VLREQVVAXLEGLGPSVSDRDPSTPKPRFXNEXLIASSTRSGRWNVHHNLDVMKISSLLI 334
           VL   + A + G  PS S R P TP PR  +        +  R N H        +S  +
Sbjct: 183 VLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQR-NQHEQEQPRASTSRAV 241

Query: 333 VPSSNLALKA 304
           +P  + AL A
Sbjct: 242 MPPRSEALTA 251


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 513 VLREQVVAXLEGLGPSVSDRDPSTPKPR 430
           +L   + A + G  PS S R P TP PR
Sbjct: 159 LLNSLLAAKVAGGQPSASSRQPPTPLPR 186


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 237  ASLTA*VTSPGLDFQVPSPMXG 172
            A L+  V  PG++F +PSP  G
Sbjct: 1745 AHLSFKVPPPGIEFTLPSPKIG 1766


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 69  VALIASSTEHRAASIKHQAWPRQXPAHIQQR 161
           V L   S + + A  +HQ WP Q     QQ+
Sbjct: 257 VNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQ 287


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 411 IASSTRSGRWNVHHNLDVMKISSLLI 334
           I  ++   RWN H++L + K  S+LI
Sbjct: 43  ICKASLDPRWNSHYDLFLGKNDSILI 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,774
Number of Sequences: 2352
Number of extensions: 12352
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)