Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G11
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 116 2e-26
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 116 2e-26
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 98 8e-21
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 87 2e-17
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 68 8e-12
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 67 1e-11
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 64 2e-10
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81107-8|CAB03231.3| 282|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription f... 29 5.6
U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell ... 29 5.6
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 5.6
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 29 5.6
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 29 5.6
AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein. 29 5.6
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 116 bits (280), Expect = 2e-26
Identities = 50/90 (55%), Positives = 65/90 (72%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P IGLGTW+SKPGEV A+K A+ GYRH+DCAH+Y N+KEVG+AL+ +EG +KRE+
Sbjct: 13 IPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREE 72
Query: 350 IFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
+FITSK+W TFH E I +L L
Sbjct: 73 LFITSKVWNTFHSEAKAHENIDIILSDLQL 102
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 472 PQAFKXGDDLFPKDSEDXFIPSXGDYXDPWGAXXALLEXGPXPXLGIFQF 621
PQ + G +LFP S DY + W A A + G +G+ F
Sbjct: 113 PQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNF 162
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 116 bits (280), Expect = 2e-26
Identities = 50/90 (55%), Positives = 65/90 (72%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P IGLGTW+SKPGEV A+K A+ GYRH+DCAH+Y N+KEVG+AL+ +EG +KRE+
Sbjct: 13 IPAIGLGTWQSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREE 72
Query: 350 IFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
+FITSK+W TFH E I +L L
Sbjct: 73 LFITSKVWNTFHSEAKAHENIDIILSDLQL 102
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 472 PQAFKXGDDLFPKDSEDXFIPSXGDYXDPWGAXXALLEXGPXPXLGIFQF 621
PQ + G +LFP S DY + W A A + G +G+ F
Sbjct: 113 PQGYAEGAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNF 162
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 97.9 bits (233), Expect = 8e-21
Identities = 47/105 (44%), Positives = 66/105 (62%)
Frame = +2
Query: 125 MAAPXPRSYSTTDARVPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGD 304
M++ P + +P IGLGTW+ E +++A+ GYRH+D A +Y NE ++GD
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTVIRNAVLAGYRHIDTATLYQNEHQIGD 60
Query: 305 ALRAKFEEGTIKREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
AL F EG +KREDIFIT+K +C PD+VEEA++ S K L L
Sbjct: 61 ALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRL 105
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P IGLGTW+S P EV AVK A+ GYR +D A +Y NE+ +G A++ EEG +KRE+
Sbjct: 16 MPVIGLGTWQSSPAEVITAVKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREE 75
Query: 350 IFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
+FIT+K W P +E ++ S K L L
Sbjct: 76 LFITTKAWTHELAPGKLEGGLRESLKKLQL 105
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +2
Query: 158 TDARVPXIGLGTWKSKP-GEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGT 334
T A++P GLGTW+ K E+T A++ A+D GYR +D AH+Y NE +G L G
Sbjct: 10 TGAQLPLFGLGTWQVKDEAELTVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSGK 69
Query: 335 IKREDIFITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
+KREDIF+TSKL T H P+ V + ++ K L L
Sbjct: 70 LKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQL 104
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P +GLGTW+S +V AVK A+ GY +D A Y NE+ +G A++ EG +KRED
Sbjct: 56 MPAVGLGTWQSNAEDVISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKRED 115
Query: 350 IFITSKL 370
+FIT+K+
Sbjct: 116 LFITTKV 122
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 68.1 bits (159), Expect = 8e-12
Identities = 38/89 (42%), Positives = 51/89 (57%)
Frame = +2
Query: 173 PXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKREDI 352
P IGLGT+K +V + A+ GYR D A +Y NEKE+GDAL + +KREDI
Sbjct: 12 PLIGLGTYKIIGDQVLPVLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNLKREDI 71
Query: 353 FITSKLWCTFHRPDLVEEAIKXSXKNLGL 439
FIT+K+ P+ VE K ++L L
Sbjct: 72 FITTKM-----HPNTVENVKKLVDESLSL 95
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 67.3 bits (157), Expect = 1e-11
Identities = 26/72 (36%), Positives = 47/72 (65%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P IG GTW+ + V+DA++ GYRH+D A + N++EV ++ + ++RE+
Sbjct: 15 MPVIGYGTWQLPKNLAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRKVRREE 74
Query: 350 IFITSKLWCTFH 385
+F++SK+W T+H
Sbjct: 75 LFLSSKIWNTYH 86
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDA-IDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRE 346
+P IG+GTW+ + E+ + V DA GYR +D A +Y NE ++G L +KRE
Sbjct: 11 MPLIGIGTWQVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKRE 70
Query: 347 DIFITSKLWCTFHRPDLVEEAIKXSXKNLGLGVLGSL 457
DI+ITSKL + E+I+ S NL + L L
Sbjct: 71 DIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLL 107
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P +G GT+K V A+ A+ GYR D A YLNEKE+G+AL+ + + R D
Sbjct: 21 IPFVGFGTYKVTGENVPPAIDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHGLSRSD 80
Query: 350 IFITSKLW 373
+F+TSK +
Sbjct: 81 VFLTSKFF 88
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGEVTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRED 349
+P + LGT+++K ++ AV +A+ +GYR D A Y NEK++G AL+ I ED
Sbjct: 10 IPKLALGTYEAKGDQLFAAVDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNICSED 69
Query: 350 IFITSKLW 373
I++TSK++
Sbjct: 70 IYLTSKVF 77
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +2
Query: 170 VPXIGLGTWKSKPGE-VTQAVKDAIDIGYRHVDCAHIYLNEKEVGDALRAKFEEGTIKRE 346
+P IGLG + + + + +++ A+ GYR D A++Y NE +G++L+ + + RE
Sbjct: 20 MPKIGLGISRIETQQDLDVSIEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQFGLTRE 79
Query: 347 DIFITSKL 370
D+FIT+K+
Sbjct: 80 DVFITTKV 87
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 140 PRSYSTTDARVPXIGLGTWKSKPGEVTQAVKDAID-IGYRHVDCAHIYLNEKEVGDALRA 316
P + + + +P IGLGT S G AV +I GYR +D A Y EK++G A++
Sbjct: 3 PTTVLSNNVEMPLIGLGTTHSG-GYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVK- 60
Query: 317 KFEEGTIKREDIFITSKLW 373
++ RE++F+++KLW
Sbjct: 61 ---NCSVPREEMFLSTKLW 76
>Z81107-8|CAB03231.3| 282|Caenorhabditis elegans Hypothetical
protein R07H5.9 protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 204 SRER*LKQSKTRSTSATGTWTAPTSTSMRRRWGTP*EPSLKKEQSKERISS 356
SR + + S++RS+S T + +APTST+ T + S KK K R SS
Sbjct: 132 SRSQQCEVSESRSSSVTASSSAPTSTTCYDSEPTKSDTS-KKSSKKSRKSS 181
>Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription
factor protein.
Length = 472
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 20 LTIVEFLKILMFDXATCRTDRIEHRAPSSKHQASSMAAPXPRSYSTTDAR 169
+T+VE+L FD TD ++H PS K++ S + P + ++T A+
Sbjct: 51 MTLVEYLVTHGFDKFAVVTDLVDH--PSFKYKDGSSSPESPSTTASTAAQ 98
>U41535-12|AAK67251.1| 438|Caenorhabditis elegans Abnormal cell
lineage protein 26 protein.
Length = 438
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 20 LTIVEFLKILMFDXATCRTDRIEHRAPSSKHQASSMAAPXPRSYSTTDAR 169
+T+VE+L FD TD ++H PS K++ S + P + ++T A+
Sbjct: 17 MTLVEYLVTHGFDKFAVVTDLVDH--PSFKYKDGSSSPESPSTTASTAAQ 64
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 128 AAPXPRSYSTTDARVPXIGLGTWKSKPGEVTQA 226
A P PR Y T A P +G+G + G V QA
Sbjct: 51 APPPPRPYGATYAPPPPMGIGAGVNPSGYVQQA 83
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 252 TGTWTAPTSTSMRRRWGTP*EPSLKKEQSKERISS 356
T W P +T+ RW E ++K Q E ISS
Sbjct: 523 TAKWETPDTTNCTHRWVAEMETAIKDNQPVEDISS 557
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 252 TGTWTAPTSTSMRRRWGTP*EPSLKKEQSKERISS 356
T W P +T+ RW E ++K Q E ISS
Sbjct: 523 TAKWETPDTTNCTHRWVAEMETAIKDNQPVEDISS 557
>AJ130957-1|CAA10262.1| 438|Caenorhabditis elegans LIN-26B protein.
Length = 438
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 20 LTIVEFLKILMFDXATCRTDRIEHRAPSSKHQASSMAAPXPRSYSTTDAR 169
+T+VE+L FD TD ++H PS K++ S + P + ++T A+
Sbjct: 17 MTLVEYLVTHGFDKFAVVTDLVDH--PSFKYKDGSSSPESPSTTASTAAQ 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,051,141
Number of Sequences: 27780
Number of extensions: 280844
Number of successful extensions: 714
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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