Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G08
(936 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.025
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.31
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 1.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 5.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 6.6
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 26 8.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 38/169 (22%), Positives = 41/169 (24%), Gaps = 5/169 (2%)
Frame = +2
Query: 209 PRXPAXGPXPXXAPPPXPPXHKXHPRXXKXXPXPPRGSXEGXPP---XKXXXPPPPQKKX 379
P P APPP P P PP + G PP PP P+
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 380 XXXGGXXGGGXPQXP-PQXGGGXKKXNTXGGGXPK-XXXRPPXXXXXXXXXXXXXXXXPP 553
G P P P + PK PP P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 554 PGGEXXXXXPPQXXGGXXXXXPPPPPXAPPPXXXXXTXPPPPKXXXXXP 700
P PP PPP APP PP P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 35.5 bits (78), Expect = 0.011
Identities = 42/178 (23%), Positives = 48/178 (26%), Gaps = 4/178 (2%)
Frame = +2
Query: 158 SXXSSGXXPLXRPKNHRPRXPAX-GPXPXXAPPPXPPXHKXHPRXXKXXPXPPRGSXEGX 334
S S P+ P + P PA G P AP PP P+ P P+ S
Sbjct: 1057 SGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV----PKPSVAAPPVPKPSVAVP 1112
Query: 335 P-PXKXXXPPPPQKKXXXXGGXXGGGXPQXP-PQXGGGXKKXNTXGGGXPKXXXR-PPXX 505
P P PP P+ G P P P + PK PP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 506 XXXXXXXXXXXXXXPPPGGEXXXXXPPQXXGGXXXXXPPPPPXAPPPXXXXXTXPPPP 679
P PP PPP APP PP P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 823 GAPPPPRXXXXXTPXXXQXAPXPXXPPPXGAPXXXPPP 936
GAPP P+ P + P P P PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.5 bits (58), Expect(2) = 0.27
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 811 KXXXGAPPPPRXXXXXTPXXXQXAPXPXXPPPXGAPXXXPP 933
K APP P P A P PPP AP P
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +3
Query: 816 AXGGPPPPPXPXXXXXXXXAXGXXPGXAPPXGRPXXPPP 932
A PPP P P A P P G P P P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 823 GAPPPPRXXXXXTPXXXQXAPXPXXPPPXGAPXXXPP 933
G PP P+ P P P P GAP P
Sbjct: 1090 GIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 5.0
Identities = 22/97 (22%), Positives = 22/97 (22%)
Frame = +1
Query: 412 PPXPPPXGGGXKKKXHXXGGXXQXATPPPXXXXXXXXXXXXXXXXXPXXGGXXXXPPPPX 591
PP P P G K A PP P PP P
Sbjct: 1131 PPVPVPSGAPPVPKP-------SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 592 XGGXXXXXPPPPPXGPPPXXXXXYPXPPPXKXXXXAP 702
PPP P P P PP P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 25.8 bits (54), Expect = 8.8
Identities = 20/91 (21%), Positives = 22/91 (24%), Gaps = 1/91 (1%)
Frame = +3
Query: 663 PXP-PPXKXXXGRPRXKXAPXPGXXXXPXIXPPXGAXXXXXXXXXXXXXKXXAXGGPPPP 839
P P P +P P P P + P A G PP
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 840 PXPXXXXXXXXAXGXXPGXAPPXGRPXXPPP 932
P P P PP P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 21.8 bits (44), Expect(2) = 0.27
Identities = 12/48 (25%), Positives = 12/48 (25%)
Frame = +1
Query: 577 PPPPXXGGXXXXXPPPPPXGPPPXXXXXYPXPPPXKXXXXAPGXKXXP 720
PP P G P P P P P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 550 PXXGGXXXXPPPPXXGGXXXXXPPPPPXGPPPXXXXXYPXPP 675
P GG PPPP G PPPPP Y P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 32.7 bits (71), Expect = 0.076
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 577 PPPPXXGGXXXXXPPPPPXGPPPXXXXXYPXPPPXKXXXXAPGXKXXPXP 726
PPPP P P PPP P PPP G P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.3 bits (70), Expect = 0.10
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 828 PPPPPXPXXXXXXXXAXGXXPGXAPPXGRPXXPPPP 935
PPPPP A P AP G P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 548 PPPGGEXXXXXPPQXXGGXXXXXPPPPPXAPP 643
PPP PP G PPPPP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.18
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +1
Query: 577 PPPPXXGGXXXXXPPPPPXGPPPXXXXXYPXPPPXKXXXXAPGXK 711
PP P GG PPPPP PP P PPP A G +
Sbjct: 753 PPAPIMGGP----PPPPP--PPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 829 PPPPRXXXXXTPXXXQXAPXPXXPPPXGAPXXXPPP 936
PPPP TP P P P G P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPI-PVPPPAPIMGGPPPPPPP 767
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 822 GGPPPPPXPXXXXXXXXAXGXXPGXAPPXGRPXXPPPP 935
GGPPPPP P PG A P PPPP
Sbjct: 759 GGPPPPPPP-------------PGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 832 PPPRXXXXXTPXXXQXAPXPXXPPPXGAPXXXPPP 936
P P P P P PPP A PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +2
Query: 548 PPPGGEXXXXXPPQXXGGXXXXXPPPPPXA---PPPXXXXXTXPPPP 679
P P PP G PPPP A PPP PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP-----PPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 4/40 (10%)
Frame = +3
Query: 828 PPPPPXPXXXXXXXXAXGXXPGXAPPXG----RPXXPPPP 935
P P P P G P PP G P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 8.8
Identities = 20/76 (26%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +2
Query: 212 RXPAXGPXPXXAPPPXP---PXHKXHPRXXKXXPXPPRGSXEGXPPXKXXXPPPPQKKXX 382
+ P P P P P P P P PP G P PPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPPAVS 786
Query: 383 XXGGXXGGGXPQXPPQ 430
G PQ P+
Sbjct: 787 AGGSRYYAPAPQAEPE 802
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -2
Query: 440 PPPXGGGXGGXPPXXXPPXXXFFFGG 363
PPP G G PP PP GG
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.025
Identities = 26/98 (26%), Positives = 28/98 (28%), Gaps = 9/98 (9%)
Frame = +1
Query: 412 PPXPPPXGGGXKKKXHXXGGXXQXATPPPXXXXXXXXXXXXXXXXXPXXGGXXXXPPPPX 591
PP PPP + K G + PPP P G PPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPP---PPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 592 XGGXXXXXPPP---------PPXGPPPXXXXXYPXPPP 678
PPP PP PP P PP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 33.9 bits (74), Expect = 0.033
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 548 PPPGGEXXXXXPPQXXGGXXXXXPPPPPXAPPPXXXXXTXPPPPKXXXXXP 700
PPP PP G PPPPP PP + P PP+ P
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPP--PPRSNAAGSIPLPPQGRSAPP 362
Score = 33.5 bits (73), Expect = 0.044
Identities = 44/237 (18%), Positives = 46/237 (19%), Gaps = 1/237 (0%)
Frame = +3
Query: 228 APXPXPPPPXXPPXTKXTPGXXKXXXXXXXXXXXXXXXXKXXXPPPPKKKXXXXGGXXGG 407
AP P P PP P K PPP +
Sbjct: 250 APAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKK 309
Query: 408 ATPXAPPXXGGGXKKXTXXGGGXPKXXXAPPXXXXXXXXXTAGXXXXPXXGGRXXXAXPP 587
P PP K G PP AG P G PP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN---AAGSIPLPPQGRSAPPPPPP 366
Query: 588 XXGGGXGXXXXXXXXXXXXXXXXXXPXPPPXKXXXGRPRXKXAPXPGXXXXPXIXPPXGA 767
G P PPP P P + P
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNP---PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 768 XXXXXXXXXXXXXKXXAXGGPPPPPXPXXXXXXXXAXGXXPGXAP-PXGRPXXPPPP 935
G P PP P P P P P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 30.7 bits (66), Expect = 0.31
Identities = 34/156 (21%), Positives = 37/156 (23%), Gaps = 11/156 (7%)
Frame = +2
Query: 245 APPPXPPXHK---XHPRXXKXXPXPPRGSXEGXPPXKXXXPPPPQKKXXXXGGXXGGGXP 415
APPP PP P P P PPP + P
Sbjct: 252 APPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRP 311
Query: 416 QXPPQXGGGXKKXNTXGGGXPKXXXRPPXXXXXXXXXXXXXXXXPPPGGEXXXXXPPQXX 595
PP + G G PP PP G PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL---PPQGRSAPPPPPPRS 368
Query: 596 GGXXXXXPPP--------PPXAPPPXXXXXTXPPPP 679
PPP P APPP + P P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 29.9 bits (64), Expect = 0.54
Identities = 41/176 (23%), Positives = 47/176 (26%), Gaps = 15/176 (8%)
Frame = +2
Query: 197 KNHRPRXP-AXGPXPXXAPPPXPPXHKXHPRXXKXXPXPPRGSXEGXPPXKXXXP----- 358
+ +R + P G PPP PP P PP+G PP P
Sbjct: 319 RRNRGKPPIGNGSSNSSLPPPPPPPRS---NAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Query: 359 PPPQKKXXXXG-------GXXGGGXPQXPPQXGGGXKKXNTXGGGXPK--XXXRPPXXXX 511
PPP G P PP G + +T P PP
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPL--GNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 512 XXXXXXXXXXXXPPPGGEXXXXXPPQXXGGXXXXXPPPPPXAPPPXXXXXTXPPPP 679
PP PP G PP PP AP P P P
Sbjct: 434 SAPPSLPMGAPAAPPLPPSAPIAPPLPAG--MPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.9 bits (64), Expect = 0.54
Identities = 26/117 (22%), Positives = 29/117 (24%)
Frame = +1
Query: 583 PPXXGGXXXXXPPPPPXGPPPXXXXXYPXPPPXKXXXXAPGXKXXPXPGXXXXHXSXXRX 762
PP G PPPP P P PP + P + P G S R
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSR- 383
Query: 763 XXXXXXXXXXXXXXKXKXXXGAPPPPRXXXXXTPXXXQXAPXPXXPPPXGAPXXXPP 933
+ PP TP P PP P PP
Sbjct: 384 --AVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP-SLPPSAPP 437
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +1
Query: 829 PPPPRXXXXXT-PXXXQXAPXPXXPPPXGAP--XXXPPP 936
PPPPR + P Q P PPP AP PPP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 827 PPPPPXTXXXXXPPXXXXXPPRXXPPPXAP 916
PPPPP PP PPP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +2
Query: 182 PLXRPKNHRPRXPAXGPXPXXAPPPXPPXHKXHPRXXKXXPXPPRGSXEGXPPXKXXXPP 361
P P + P P P A PP PP P P P PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP-----PLPPAAPAPPP 478
Query: 362 PP 367
P
Sbjct: 479 AP 480
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.18
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +2
Query: 581 PPQXXGGXXXXXP---PPPPXAPPPXXXXXTXPPPP 679
PPQ P PPPP APP + PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +1
Query: 826 APPPPRXXXXXTPXXXQXAPXPXXPP-PXGAPXXXPPP 936
A PP P P P PP P G P PPP
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +1
Query: 577 PPPPXXGGXXXXXPPPPPXGPPPXXXXXYPXPPPXKXXXXAPGXKXXPXPG 729
PPPP PP P GPP PPP AP P PG
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP-------SAPPPPLPASSAPS---VPNPG 1747
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +2
Query: 827 PPPPPXTXXXXXPPXXXXXP--PRXXPPPXAPXXXXP 931
PPPPP + PP P P PPP P P
Sbjct: 1707 PPPPPMS--VPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 617 PPPPPXAPPPXXXXXTXPPPP 679
PPPPP PPP + PPPP
Sbjct: 9 PPPPP--PPPGFEPPSQPPPP 27
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 577 PPPPXXGGXXXXXPPPPPXGPPP 645
PPPP G PPPP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPP--PPP 30
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 620 PPPPXAPPPXXXXXTXPPPP 679
PPPP PP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 562 GXXXXPPPPXXGGXXXXXPPPPPXG 636
G PPPP PPPPP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 822 GGPPPPPXPXXXXXXXXAXGXXPGXAPPXGRPXXPPP 932
G PPPPP P PG PP P PPP
Sbjct: 7 GNPPPPPPP-------------PGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 194 PKNHRPRXPAXGPXPXXAPPPXPP 265
P N P P G P PPP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 559 GGXXXXPPPPXXGGXXXXXPPPPP 630
G PPPP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 616 PPPPPXGPPPXXXXXYPXPP 675
PPPPP G P P PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.2
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Frame = -1
Query: 429 WGGXWGXPPPXXPPXXXXFFWGG-----GGXXFFXGGXPSXDPRGGXGXXFXXRGWXLWX 265
+GG G PPP +GG GG F GG P G G G+
Sbjct: 193 FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG-PGGFEGGPGGFGGGPGGFGGGL 251
Query: 264 GGXGGG-AXXGXGP 226
GG GGG G GP
Sbjct: 252 GGFGGGPGGFGGGP 265
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 704 PGAXXXXFXGGGXGXXXXXXGGGPXGGGGGXXXXXPPXXGGG 579
PG GG G G G GGG G P GGG
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 674 GGXGXXXXXXGGGPXGGGGG 615
GG G GGGP G GGG
Sbjct: 245 GGFGGGLGGFGGGPGGFGGG 264
Score = 26.2 bits (55), Expect = 6.6
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Frame = -1
Query: 441 PPPXWGGXWGXPPPXXPPXXXXFFWG-GGGXXFFXGGXPSXDPRGGXGXXFXXRGWXLWX 265
PPP GG G G GGG F GG P G G G+
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG-PGGFGGGPGGFGGGLGGFGGGP 258
Query: 264 GGXGGGAXXGXGP 226
GG GGG GP
Sbjct: 259 GGFGGGPGGHGGP 271
Score = 25.8 bits (54), Expect = 8.8
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 367 GGGGXXXFXGGXPFX*PSGGGGXXFXXPGVXFVXGGXXGGGGXGXGAXRRXPG 209
G GG GG P P GG F G G GG G G G PG
Sbjct: 189 GFGGFGGGSGGPP---PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
Score = 25.4 bits (53), Expect(2) = 1.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -2
Query: 704 PGAXXXXFXGGGXGXXXXXXGGGPXGGGGGXXXXXPPXXGGGG 576
PG G G G G G GGG G P GG G
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 21.0 bits (42), Expect(2) = 1.9
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = -2
Query: 932 GGXXXGAPXGGGXXGXGAXCXXXGVXXXXXRGGGGAP 822
GG G P G G G G G GG P
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP 230
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/59 (28%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Frame = +2
Query: 194 PK-NHRPRXPAXGPXPXXAPPPXPPXHKXHPRXXKXXPXPPRGSXEGXPPXKXXXPPPP 367
PK H + A P PP P P P P S PP PP P
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 548 PPPGGEXXXXXPPQXXGGXXXXXPPPPPXAPPP 646
PPP P PP PP PPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +2
Query: 245 APPPXPPXHKXHPRXXKXXPXPPRGSXEGXPPXKXXXPP 361
A PP PP + +P P + PP + PP
Sbjct: 204 AQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 200 NHRPRXPAXGPXPXXAPPPXPPXHKXHPRXXKXXPXPP 313
NH P P P PP H HP PP
Sbjct: 155 NHVRSCPPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPP 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.152 0.549
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,429,018
Number of Sequences: 5004
Number of extensions: 47961
Number of successful extensions: 428
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -