Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_G02
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 38 0.008
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.17
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 34 0.17
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 34 0.17
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.17
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.29
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.39
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.39
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.39
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.51
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.51
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.51
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 0.89
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 1.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 1.2
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.6
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.1
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.7
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 30 2.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 2.7
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 30 2.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 2.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 3.6
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 3.6
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 6.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.3
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 28 8.3
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 28 8.3
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.3
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.008
Identities = 25/87 (28%), Positives = 29/87 (33%), Gaps = 5/87 (5%)
Frame = -2
Query: 492 GGXPKXXPPPPRXGPXLXARXTXXXXXXXREX---QRXPPP--GXXPXXPPPXGXPXSXX 328
G + PPPP+ T E +R PPP G PPP G P
Sbjct: 183 GNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLS 242
Query: 327 XXXXXPKTPFXPPXSXGGAPXPPXXFP 247
+ P PP G P PP P
Sbjct: 243 GEGNASRRPPPPPKGTGSPPPPPTGEP 269
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Frame = -2
Query: 489 GXPKXXPPPPRXG-----PXLXARXTXXXXXXXREXQRXPPP--GXXPXXPPPXGXPXSX 331
G PPPP G P +R PPP G PPP G P
Sbjct: 58 GNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDL 117
Query: 330 XXXXXXPKTPFXPPXSXGGAPXPPXXFP 247
+ P PP G P PP P
Sbjct: 118 SGEGNASRRPPPPPKGTGSPPPPPTGEP 145
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/87 (28%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = -2
Query: 489 GXPKXXPPPPRXG----PXLXARXTXXXXXXXREXQRXPPP--GXXPXXPPPXGXPXSXX 328
G PPPP G P +R PPP G PPP G P
Sbjct: 90 GNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLS 149
Query: 327 XXXXXPKTPFXPPXSXGGAPXPPXXFP 247
+ P PP G P PP P
Sbjct: 150 GEGNASRRPPPPPKGTGSPPPPPTGEP 176
Score = 37.1 bits (82), Expect = 0.018
Identities = 25/87 (28%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = -2
Query: 489 GXPKXXPPPPRXG----PXLXARXTXXXXXXXREXQRXPPP--GXXPXXPPPXGXPXSXX 328
G PPPP G P +R PPP G PPP G P
Sbjct: 121 GNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLS 180
Query: 327 XXXXXPKTPFXPPXSXGGAPXPPXXFP 247
+ P PP G P PP P
Sbjct: 181 TEGNASRRPPPPPKGTGTPPPPPTGEP 207
Score = 35.1 bits (77), Expect = 0.072
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -2
Query: 387 PPPGXXPXXPPPXGXPXSXXXXXXXPKTPFXPPXSXGGAPXPPXXFP 247
PP G PPP G P + P PP G P PP P
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEP 82
Score = 33.9 bits (74), Expect = 0.17
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Frame = -2
Query: 489 GXPKXXPPPPRXG---PXLXARXTXXXXXXXREXQRXPPP---GXXPXXPPPXGXPXSXX 328
G PPPP G P R PPP G PPP G P
Sbjct: 214 GYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLS 273
Query: 327 XXXXXPKTPFXPPXSXGGAPXPPXXFP 247
+ P PP G P PP P
Sbjct: 274 GEGNASRRP-PPPPKGTGTPPPPTGEP 299
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -3
Query: 386 PPRGXXRFXPXXXGXXXAXXPPXXPQKPLXPPPXXXGGPPXPPXPFPXG 240
PP G P PP + PPP G PP PP P G
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -3
Query: 386 PPRGXXRFXPXXXGXXXAXXPPXXPQKPLXPPPXXXGGPPXPPXPF 249
PP F P G PP + PPP GG P PP F
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 335 AXXPPXXPQKPLXPPPXXXGGPPXPPXPFPXG 240
A PP P P+ P G PP PP P P G
Sbjct: 628 AAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -3
Query: 335 AXXPPXXPQKPLXPPPXXXGGPPXPPXPFPXG 240
A PP P P+ P G PP PP P P G
Sbjct: 454 AAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 261 GXXGPPPXXGGGXKGFLGXXGGXXGXXGPPXXG 359
G GPPP G G G G G G GPP G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -3
Query: 392 GSPPRGXXRFXPXXXGXXXAXXPPXXPQKPLXPPPXXXGGPPXPPXPFPXG 240
G P G F P G A PP P+ PP G P PF G
Sbjct: 424 GPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPG-GNPFARG 473
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 392 GSPPRGXXRFXPXXXGXXXAXXPPXXPQKPLXPPPXXXGGPPXPPXPFP 246
G+PP+G + P G A PP PQ+ P P GGPP P P
Sbjct: 332 GAPPQGPPQGGPPQ-GSFGA--PP--PQQFHAPSPQSFGGPPPPVSSAP 375
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 405 REXQRXPPPGXXPXXPPPXGXP--XSXXXXXXXPKTPFXPPXSXGGAPXPPXXFPXXXP 235
R ++ PP G P PPP G P P PP G P PP P P
Sbjct: 226 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -2
Query: 471 PPPPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXPXSXXXXXXXPKTPFXP 292
PPPP G R T PP G P PP G P P T P
Sbjct: 256 PPPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLP 313
Query: 291 PXSXGGAPXP 262
P GG+P P
Sbjct: 314 PPQAGGSPPP 323
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 507 RGXXXGGXPKXXPP---PPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
R G P PP PPR P + T R+ P G P PP G P
Sbjct: 409 RSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRP 467
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -2
Query: 462 PRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
PR GP + + R +R PP G P PP G P
Sbjct: 386 PRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRP 426
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -3
Query: 392 GSPPRGXXRFXPXXXGXXXAXXPPXX--PQKPLX--PPPXXXGGPPXPPXP 252
GSPP P PP P P PPP G PP PP P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = -2
Query: 492 GGXPKXXPPPPRXGPXLXARXTXXXXXXXREX----QRXPPPGXXPXXPPPXGXP 340
G P PPP+ G T R+ +R PP G P PP G P
Sbjct: 305 GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 359
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -2
Query: 492 GGXPKXXPP---PPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
G P PP P R GP + R +R PP G P PP G P
Sbjct: 455 GSPPTGSPPTGRPHRGGPG--KSESSESREGPRGPRRSPPTGSPPTGSPPTGAP 506
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 405 REXQRXPPPGXXPXXPPPXGXP--XSXXXXXXXPKTPFXPPXSXGGAPXPPXXFPXXXP 235
R ++ PP G P PPP G P P PP G P PP P P
Sbjct: 247 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -2
Query: 471 PPPPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXPXSXXXXXXXPKTPFXP 292
PPPP G R T PP G P PP G P P T P
Sbjct: 277 PPPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLP 334
Query: 291 PXSXGGAPXP 262
P GG+P P
Sbjct: 335 PPQAGGSPPP 344
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 507 RGXXXGGXPKXXPP---PPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
R G P PP PPR P + T R+ P G P PP G P
Sbjct: 430 RSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRP 488
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -2
Query: 462 PRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
PR GP + + R +R PP G P PP G P
Sbjct: 407 PRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRP 447
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -3
Query: 392 GSPPRGXXRFXPXXXGXXXAXXPPXX--PQKPLX--PPPXXXGGPPXPPXP 252
GSPP P PP P P PPP G PP PP P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = -2
Query: 492 GGXPKXXPPPPRXGPXLXARXTXXXXXXXREX----QRXPPPGXXPXXPPPXGXP 340
G P PPP+ G T R+ +R PP G P PP G P
Sbjct: 326 GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 380
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -2
Query: 492 GGXPKXXPP---PPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
G P PP P R GP + R +R PP G P PP G P
Sbjct: 476 GSPPTGSPPTGRPHRGGPG--KSESSESREGPRGPRRSPPTGSPPTGSPPTGAP 527
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 405 REXQRXPPPGXXPXXPPPXGXP--XSXXXXXXXPKTPFXPPXSXGGAPXPPXXFPXXXP 235
R ++ PP G P PPP G P P PP G P PP P P
Sbjct: 232 RGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/70 (32%), Positives = 24/70 (34%)
Frame = -2
Query: 471 PPPPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXPXSXXXXXXXPKTPFXP 292
PPPP G R T PP G P PP G P P T P
Sbjct: 262 PPPPAAGSPPPPR-TGSPPPPPTGSPPPPPAGGSP-PPPRAGSPPPPPPPRGSPPTGSLP 319
Query: 291 PXSXGGAPXP 262
P GG+P P
Sbjct: 320 PPQAGGSPPP 329
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 507 RGXXXGGXPKXXPP---PPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
R G P PP PPR P + T R+ P G P PP G P
Sbjct: 415 RSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRP 473
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -2
Query: 462 PRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
PR GP + + R +R PP G P PP G P
Sbjct: 392 PRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPTGRP 432
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = -3
Query: 392 GSPPRGXXRFXPXXXGXXXAXXPPXX--PQKPLX--PPPXXXGGPPXPPXP 252
GSPP P PP P P PPP G PP PP P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/55 (30%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = -2
Query: 492 GGXPKXXPPPPRXGPXLXARXTXXXXXXXREX----QRXPPPGXXPXXPPPXGXP 340
G P PPP+ G T R+ +R PP G P PP G P
Sbjct: 311 GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 365
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -2
Query: 492 GGXPKXXPP---PPRXGPXLXARXTXXXXXXXREXQRXPPPGXXPXXPPPXGXP 340
G P PP P R GP + R +R PP G P PP G P
Sbjct: 461 GSPPTGSPPTGRPHRGGPG--KSESSESREGPRGPRRSPPTGSPPTGSPPTGAP 512
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = -3
Query: 470 PPPPGXXRXFXXXXXXXXXPRXGXXKGSPPRGXXR--FXPXXXGXXXAXXPPXXPQKPLX 297
PPPPG G PP P G PP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 296 PPP--XXXGGPPXPPXP 252
PPP GGPP PP P
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 386 PPRGXXRFXPXXXGXXXAXXPPXXPQ---KPLXPPPXXXGGPPXPPXPFPXG 240
PP P G P P P PPP G PP PP P P G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = -3
Query: 470 PPPPGXXRXFXXXXXXXXXPRXGXXKGSPPRGXXR--FXPXXXGXXXAXXPPXXPQKPLX 297
PPPPG G PP P G PP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 296 PPP--XXXGGPPXPPXP 252
PPP GGPP PP P
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 386 PPRGXXRFXPXXXGXXXAXXPPXXPQ---KPLXPPPXXXGGPPXPPXPFPXG 240
PP P G P P P PPP G PP PP P P G
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = -3
Query: 470 PPPPGXXRXFXXXXXXXXXPRXGXXKGSPPRGXXR--FXPXXXGXXXAXXPPXXPQKPLX 297
PPPPG G PP P G PP P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 296 PPP--XXXGGPPXPPXP 252
PPP GGPP PP P
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 386 PPRGXXRFXPXXXGXXXAXXPPXXPQ---KPLXPPPXXXGGPPXPPXPFPXG 240
PP P G P P P PPP G PP PP P P G
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 326 PPXXPQKP-LXPPPXXXGGPPXPPXPFPXG 240
PP P KP + PPP PP PP P G
Sbjct: 91 PPPPPPKPTIRPPPIPASPPPRPPASEPVG 120
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 370 PXFXPXXGGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
P P P P PP PK PPP P P
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -3
Query: 326 PPXXPQKP-LXPPPXXXGGPPXPPXPFPXG 240
PP P KP + PPP PP PP P G
Sbjct: 313 PPPPPPKPTIRPPPIPASPPPRPPASEPVG 342
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 370 PXFXPXXGGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
P P P P PP PK PPP P P
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRP 335
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Frame = -3
Query: 326 PPXXPQK------PLXPPPXXXGGPPXPPXPFPXG 240
PP PQ P PPP GGPP PP P P G
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP-PGG 598
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 358 PXXGGPXXPXXPPXXPKNPFXPPPXXGGGP 269
P GG P P P NP P GGGP
Sbjct: 1437 PSTGGDPSPGPSPNGPSNPSVPESSTGGGP 1466
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P+ PPP GPP PP P
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPGP 158
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P+ PPP GPP PP P
Sbjct: 132 PPQQPCEPITPPPWKPCPQGPPGPPGP 158
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P+ PPP GPP PP P
Sbjct: 132 PPQQPCEPITPPPCKPCPQGPPGPPGP 158
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 270 GPPPXXGG-----GXKGFLGXXGGXXGXXGPPXXGXKXG 371
GPPP GG G G +G G G GPP G + G
Sbjct: 153 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG 191
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +3
Query: 270 GPPPXXGG-----GXKGFLGXXGGXXGXXGPPXXGXKXG 371
GPPP GG G G +G G G GPP G + G
Sbjct: 433 GPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGG 471
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P P+ PPP GPP PP P
Sbjct: 132 PPQQPCDPITPPPCQPCPQGPPGPPGP 158
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P P+ PPP GPP PP P
Sbjct: 99 PPQQPCDPITPPPCQPCPQGPPGPPGP 125
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P P+ PPP GPP PP P
Sbjct: 132 PPQQPCDPITPPPCQPCPQGPPGPPGP 158
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 370 PXFXPXXGGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
P P GP P PP NP P G GP P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 370 PXFXPXXGGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
P P GP P PP NP P G GP P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 370 PXFXPXXGGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
P P GP P PP NP P G GP P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 370 PXFXPXXGGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
P P GP P PP NP P G GP P
Sbjct: 151 PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGP 187
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/85 (27%), Positives = 25/85 (29%), Gaps = 6/85 (7%)
Frame = -2
Query: 471 PPPPRXGPXLXARXTXXXXXXXREXQ---RXPPPGXXPXXPPPX--GXPX-SXXXXXXXP 310
PPPP P L T R PPP P PP G P
Sbjct: 24 PPPPPAPPALPRELTQISTETAAAVAALVRKPPPSLPPSTMPPGPHGMPFMGGPPPHHQY 83
Query: 309 KTPFXPPXSXGGAPXPPXXFPXXXP 235
+ PP G P PP + P
Sbjct: 84 HLQYPPPHGLGPPPPPPHYYTQPPP 108
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P PPP GPP PP P
Sbjct: 134 PPVAPCEPTTPPPCKPCPQGPPGPPGP 160
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -1
Query: 349 GGPXXPXXPPXXPKNPFXPPPXXGGGPXXP 260
G P P PP P P PPP P P
Sbjct: 125 GAPGHPGKPPQSPCEPLTPPPCPACPPGPP 154
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P PPP GPP PP P
Sbjct: 129 PPVAPCEPTTPPPCKPCPQGPPGPPGP 155
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P PPP GPP PP P
Sbjct: 136 PPTAPCEPTTPPPCKPCPQGPPGPPGP 162
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P PPP GPP PP P
Sbjct: 129 PPVAPCEPTTPPPCKPCPQGPPGPPGP 155
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 326 PPXXPQKPLXPPP--XXXGGPPXPPXP 252
PP P +P PPP GPP PP P
Sbjct: 136 PPTAPCEPTTPPPCKPCPQGPPGPPGP 162
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 314 PQKPLXPPPXXXGGPPXPPXPFPXG 240
P P PP G PP PP P P G
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 314 PQKPLXPPPXXXGGPPXPPXPFPXG 240
P P PP G PP PP P P G
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPGG 818
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Frame = -2
Query: 504 GXXXGGXPKXXPPPPRXGPXLXARXTXXXXXXXREXQRXPPP--GXXPXXPPPX-----G 346
G G PP P P + + PPP G P PPP G
Sbjct: 250 GMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG 309
Query: 345 XPXSXXXXXXXPKTPFXPPXSXGGAPXPP 259
P P + F PP G P PP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -3
Query: 392 GSPPRGXXRFXPXXXGXXXAXXPPXXPQKPLXPPPXXXGGPPXPP-XPFPXG 240
G+P R P G PP P + P P GPP P P P G
Sbjct: 126 GAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGPQG 177
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 7/89 (7%)
Frame = -2
Query: 504 GXXXGGXPKXXPPPPRXGPXLXARXTXXXXXXXREXQRXPPP--GXXPXXPPPX-----G 346
G G PP P P + + PPP G P PPP G
Sbjct: 260 GMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG 319
Query: 345 XPXSXXXXXXXPKTPFXPPXSXGGAPXPP 259
P P + F PP G P PP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +2
Query: 260 GGXGAPPXXXGGXKGVFXXXXXXXXLXGXPXGGGKXGXXPGGGXLWXSRXXXXXXXVXRA 439
GG G GG G + G GGG G GGG W
Sbjct: 33 GGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDW---G 89
Query: 440 XRXGPXRGGGG 472
G RGGGG
Sbjct: 90 GNGGGGRGGGG 100
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Frame = -3
Query: 326 PPXXPQKPLXPPPXXX-----GGPPXPPXP 252
PP P +P+ PPP GPP PP P
Sbjct: 137 PPQQPCEPITPPPCKPCPQGPAGPPGPPGP 166
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 326 PPXXPQKPLXPPPXXXGGPPXPPXPFP 246
PP P P P PP PP P P
Sbjct: 178 PPPRPPPQEPPKPVEQAAPPPPPAPMP 204
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 323 PXXPQKPLXPPPXXXGGPPXPPXPFP 246
P P + PPP PP PP P P
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPP 150
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 341 GXPXGGGKXGXXPGGGXLWXSRXXXXXXXVXRAXRXGPXRGGGGXXXG 484
G P GGG+ G GGG R R G G GG G
Sbjct: 140 GAPRGGGRGGSRRGGGGRGGGRTNSGGEETARDTDGGERGGRGGGRRG 187
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 326 PPXXPQKPLXPPPXXXGGPPXPPXP 252
PP P + PPP PP PP P
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPP 72
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 326 PPXXPQKPLXPPPXXXGGPPXPPXP 252
P P+ PPP PP PP P
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPPPP 313
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = -3
Query: 326 PPXXPQKPLXPPPXXXGGPPXPPXP 252
P P+ PPP PP PP P
Sbjct: 289 PSSMKMSPIPPPPIKEESPPPPPPP 313
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 358 PXXGG-PXXPXXPPXXPKNPFXPPP 287
P GG P P PP P +P PPP
Sbjct: 130 PGAGGLPGNPGRPPAQPCHPITPPP 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,162,174
Number of Sequences: 27780
Number of extensions: 190843
Number of successful extensions: 2226
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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