Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_F22
(920 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 38 0.010
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 36 0.041
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 33 0.38
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 33 0.38
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 33 0.38
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 33 0.38
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 32 0.50
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 32 0.50
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.88
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 0.88
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 0.88
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 31 1.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.2
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.2
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 1.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.0
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 30 2.7
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 2.7
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.5
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 29 4.7
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 29 4.7
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 4.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.7
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 29 4.7
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 29 4.7
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 29 4.7
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 29 4.7
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 29 4.7
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 4.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.7
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 6.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 6.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.2
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 8.2
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 8.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.2
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 8.2
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 37.9 bits (84), Expect = 0.010
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
P PPPP P P PPPP K P P PLF P P
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPS 1398
Query: 903 XXK 911
K
Sbjct: 1399 EEK 1401
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = -2
Query: 901 GGXGRXFFFXXGXXKKRGXXXGVWXGXXXXFFFXXGGGGXAPXWGXXXGIGXGGGGXXXG 722
GG GR + G RG W G + GGGG WG G G GGGG G
Sbjct: 41 GGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGG---NWGGNGGGGNGGGGRGGG 97
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 832 WXGXXXXFFFXXGGGGXAPXW-GXXXGIGXGGGGXXXG 722
W FF GG P W G G G GGGG G
Sbjct: 28 WGFRPSPFFGGRSGGWGRPGWGGGGPGWGRGGGGSGWG 65
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = +3
Query: 711 GGGXPXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXR 890
GG P PPP P P P PPPP P P P P K
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPP------PPPPGGCPPPPP---PPPPGGFKGG 783
Query: 891 PXPPXXKGAF 920
P PP G F
Sbjct: 784 PPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P G PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G P PPP P P P PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 26.2 bits (55), Expect(2) = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 469 PPPPPXGXGXGGXXPFXPXXXPRPVS 392
PPPPP G GG P P P++
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMA 797
Score = 22.2 bits (45), Expect(2) = 2.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 520 PPXXXGGGGFFXGKXKXPPPPPXG 449
PP GG PPPPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPG 749
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = +3
Query: 711 GGGXPXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXR 890
GG P PPP P P P PPPP P P P P K
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPP------PPPPGGCPPPPP---PPPPGGFKGG 783
Query: 891 PXPPXXKGAF 920
P PP G F
Sbjct: 784 PPPPPPPGMF 793
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P G PPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G P PPP P P P PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 26.2 bits (55), Expect(2) = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 469 PPPPPXGXGXGGXXPFXPXXXPRPVS 392
PPPPP G GG P P P++
Sbjct: 772 PPPPPPGGFKGGPPPPPPPGMFAPMA 797
Score = 22.2 bits (45), Expect(2) = 2.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 520 PPXXXGGGGFFXGKXKXPPPPPXG 449
PP GG PPPPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPG 749
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = +3
Query: 711 GGGXPXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXR 890
GG P PPP P P P PPPP P P P P K
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPP------PPPPGGCPPPPP---PPPPGGFKGG 366
Query: 891 PXPPXXKGAF 920
P PP G F
Sbjct: 367 PPPPPPPGMF 376
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P G PPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPP 329
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G P PPP P P P PPPP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 26.2 bits (55), Expect(2) = 2.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 469 PPPPPXGXGXGGXXPFXPXXXPRPVS 392
PPPPP G GG P P P++
Sbjct: 355 PPPPPPGGFKGGPPPPPPPGMFAPMA 380
Score = 22.2 bits (45), Expect(2) = 2.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 520 PPXXXGGGGFFXGKXKXPPPPPXG 449
PP GG PPPPP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPG 332
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 723 PXXXPPP-PXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPX 896
P P P P P P P P P P K P P P+ F P K K +P
Sbjct: 126 PMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKPKPK 185
Query: 897 P 899
P
Sbjct: 186 P 186
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P PIP P P P P K K P P P+ P K +P P
Sbjct: 202 PKPMPIPKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPKP 256
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P P K K P P
Sbjct: 242 PKPMPFPKPMPKPKPKPKPMPKPKPKLKLKPKPMPFPKPKPKLKPKTKPKKNPVP 296
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P+P P P P K K P P+ F P K K +P P
Sbjct: 30 PFPSPMPFPKPM-----PKPKPKPKPMPKHKPKPFPKPMLFPKPMPKHKPKPFP 78
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P+P P P P P K K P P+ F P K P P
Sbjct: 88 PFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFP 142
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 506 GGGGXFFXEXKXPPPPPPXXRXGGGG 429
GGGG + PPPPPP GGG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1
Query: 506 GGGGXFFXEXKXPPPPPPXXRXGGGG 429
GGGG + PPPPPP GGG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPXGXGXGGXXP 425
GGGG G PPPPP G G GG P
Sbjct: 22 GGGG--GGCCAPPPPPPCGGGCGGGAP 46
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 717 GXPXXXPP-PPXPIPXXXPHXGAXPPPPXXKKKXXXXP 827
G P PP PP P+P P PPPP K P
Sbjct: 67 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPP 104
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXP 851
PPPP P+ PPPP + P P P
Sbjct: 76 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 114
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +3
Query: 717 GXPXXXPP-PPXPIPXXXPHXGAXPPPPXXKKKXXXXP 827
G P PP PP P+P P PPPP K P
Sbjct: 289 GRPTESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPP 326
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXP 851
PPPP P+ PPPP + P P P
Sbjct: 298 PPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPRPP 336
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 520 PPXXXGGGGFFXGKXKXPPPPPXGXGXGGXXPFXP 416
PP G G PPPPP G GG P P
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPPXXKG 914
PPP P+P H PPPP P P+ P P PP G
Sbjct: 488 PPPPPMPSINGH-APNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVG 545
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
PPPP P P PPP P PL P P P
Sbjct: 470 PPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPP 524
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P P GA PPP
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPP 651
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 470 PPPPPPXXRXGGGGP 426
PPPPPP G GGP
Sbjct: 649 PPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.88
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P P GA PPP
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPP 477
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 470 PPPPPPXXRXGGGGP 426
PPPPPP G GGP
Sbjct: 475 PPPPPPPPPSGAGGP 489
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
PPP P P G+ PPPP + P +P P +++ PP
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/55 (25%), Positives = 18/55 (32%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
PPPP P + PPPP + P P P ++ R P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1
Query: 476 KXPPPPPPXXRXGGGGP 426
K PPPPP + GGGGP
Sbjct: 510 KPPPPPPQSQQAGGGGP 526
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 705 GXGGGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G GG P PPPP P A PPPP
Sbjct: 668 GLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -2
Query: 868 GXXKKRGXXXGVWXGXXXXFFFXXGGGGXAPXWGXXXGIGXGGGG 734
G + G G W G G GG WG G G GGGG
Sbjct: 56 GWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGG 100
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -2
Query: 898 GXGRXFFFXXGXXKKRGXXXGVWXGXXXXFFFXXGGGGXAPX-WGXXXGIGXGGGG 734
G GR + G + G G W G GGGG WG G G GG G
Sbjct: 82 GGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRG 137
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 850 GXXXGVWXGXXXXFFFXXGGGGXAPXWGXXXGIGXGGGGXXXG 722
G G W G + GGGG WG G G G GG G
Sbjct: 26 GGGPGRWGGWGGNRW---GGGGGPGGWGNNGGGGWGRGGGRGG 65
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 705 GXGGGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G GG P PPPP P A PPPP
Sbjct: 668 GLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -1
Query: 515 PXXGGGGXFFXEXKXPPPPPPXXRXGGGG 429
P GGGG PPPPPP GGGG
Sbjct: 20 PSGGGGGC----GCAPPPPPPACGCGGGG 44
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPXGXGXGG 434
GGGG G PPPP G G GG
Sbjct: 44 GGGGCGGGCAPPPPPPACGGGCGG 67
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPXGXGXGG 434
GGGG G PPPP G G GG
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGG 124
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG--*PPPXP 704
GGGG G G G GGGG G PPP P
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPP 58
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGG-GXXXG*PPPXP 704
GGGG G G G GGG G PPP P
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPP 59
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P P K K +P P
Sbjct: 165 PEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEP 219
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P P K K +P P
Sbjct: 199 PKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEP 253
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXP-PPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P P K K +P P
Sbjct: 181 PDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNP 235
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P P K K P P
Sbjct: 201 PEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKP 255
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXP-PPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P K K +P P
Sbjct: 219 PKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKP 273
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P + P P P K K P P P P K RP P
Sbjct: 247 PKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKP 301
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKK-----XXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
PPPP P P G PPPP + P P P + P + P P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP--PAP 374
Query: 900 PXXKG 914
P G
Sbjct: 375 PSGHG 379
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/92 (26%), Positives = 28/92 (30%)
Frame = -2
Query: 637 PXLGKKPPXXXXG*VFXPPXPXXXXXXXXXXXXXXGKXXPPXXXGGGGFFXGKXKXPPPP 458
P + +PP ++ PP P PP G G PPPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP---PGMGGMPPPP 337
Query: 457 PXGXGXGGXXPFXPXXXPRPVSFFXKKXXXPP 362
P G G P P PR S PP
Sbjct: 338 PPGMRYPGGMP--PPPPPRYPSAGPGMYPPPP 367
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
P P PP P P PPPP P P P F P P PP
Sbjct: 281 PGMTPRPPPP-PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G P PPPP P G PPPP
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +3
Query: 723 PXXXPPPPX--PIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXP 851
P PP P P P P G PPPP P P P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPXGXGXGG 434
GGGG G PPP P G G GG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGG 85
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG*PPPXP 704
GGGG G G G GGGG PPP P
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCA--PPPAP 54
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = -2
Query: 796 GGGGXAPXWG-XXXGIGXGGGGXXXG---*PPPXP 704
GGGG AP G G GGGG G PPP P
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPXGXGXGG 434
GGGG G PPP P G G GG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGG 85
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG*PPPXP 704
GGGG G G G GGGG PPP P
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCA--PPPAP 54
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Frame = -2
Query: 796 GGGGXAPXWG-XXXGIGXGGGGXXXG---*PPPXP 704
GGGG AP G G GGGG G PPP P
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKK-----XXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
PPPP P P G PPPP + P P P + P + P P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP--PAP 384
Query: 900 PXXKG 914
P G
Sbjct: 385 PSGHG 389
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/92 (26%), Positives = 28/92 (30%)
Frame = -2
Query: 637 PXLGKKPPXXXXG*VFXPPXPXXXXXXXXXXXXXXGKXXPPXXXGGGGFFXGKXKXPPPP 458
P + +PP ++ PP P PP G G PPPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP---PGMGGMPPPP 347
Query: 457 PXGXGXGGXXPFXPXXXPRPVSFFXKKXXXPP 362
P G G P P PR S PP
Sbjct: 348 PPGMRYPGGMP--PPPPPRYPSAGPGMYPPPP 377
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
P P PP P P PPPP P P P F P P PP
Sbjct: 291 PGMTPRPPPP-PSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G P PPPP P G PPPP
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Frame = +3
Query: 723 PXXXPPPPX--PIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXP 851
P PP P P P P G PPPP P P P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G PPPP P P P PPPP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPPP 176
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P P A PPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKK 812
P PPPP +P P PPPP ++K
Sbjct: 156 PPPPPPPPVSVPSSKP---TPPPPPPAQQK 182
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPP 791
P PPPP P P P A PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 714 GGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G PPPP P P P PPPP
Sbjct: 149 GATSSAPPPPPPPPPVSVPSSKPTPPPP 176
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P P A PPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKK 812
P PPPP +P P PPPP ++K
Sbjct: 156 PPPPPPPPVSVPSSKP---TPPPPPPAQQK 182
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPP 791
P PPPP P P P A PP
Sbjct: 2 PPPPPPPPPPPPPPPPAASAPPP 24
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 705 GXGGGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G GGG P P P P G PPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPP 54
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 705 GXGGGXPXXXP---PPPXPIPXXXPHXGAXPPPP 797
G GGG P PPP P+ P PPPP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXP 851
PPPP P P P A PPPP K TP P
Sbjct: 84 PPPPPPPPP--PTLKAPPPPPILGLKTPSKSLKTPTPRP 120
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
P PPPP P P G+ PPP P P P P PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPP 794
P PPP P P P G+ PPP
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTP 839
PPPP P P G+ PPP P +P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
P PPPP P P G+ PPP P P P P PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPP 794
P PPP P P P G+ PPP
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTP 839
PPPP P P G+ PPP P +P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPP 902
P PPPP P P G+ PPP P P P P PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPP 794
P PPP P P P G+ PPP
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTP 839
PPPP P P G+ PPP P +P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPXGXGXGGXXPF 422
G GG G + PPPPP G G P+
Sbjct: 200 GSGGSGGGSGRFPPPPPPYGGGGRRRPY 227
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 805 FXXGGGGXAPXWGXXXGIGXGGGGXXXG*PPPXP 704
F GGGG G G G GGG PPP P
Sbjct: 186 FGPGGGGGG--MGGGGGSGGSGGGSGRFPPPPPP 217
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTP 839
PPPP P+P GA PPPP P P
Sbjct: 562 PPPPPPLPQNLS--GAPPPPPPPPPMLGGPPPPPP 594
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 714 GGXPXXXPPPPXP--IPXXXPHXGAXPPPP 797
GG P PPPP IP P GA PPPP
Sbjct: 92 GGIP---PPPPMMGGIPPPPPMFGAPPPPP 118
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 811 FFFXXGGGGXAPXWGXXXGIGXGGGG 734
F F GGGG G G G GGGG
Sbjct: 17 FLFPGGGGGGGCGGGCGGGCGGGGGG 42
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 705 GXGGGXPXXXPPPPXPI-PXXXPHXGAXPPPP 797
G GGG PPPP P P G PPP
Sbjct: 24 GGGGGCGCGAPPPPPACAPPPAPACGGGAPPP 55
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = -1
Query: 515 PXXGGGGXFFXEXKXPPP----PPPXXRXGGGGP 426
P GGGG PPP PPP GGG P
Sbjct: 20 PSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAP 53
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+P PPPP
Sbjct: 489 PPPPPPLPPIATPSSVPPPPP 509
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+P GA PPPP
Sbjct: 794 PPPPPPLPPI--SSGAPPPPP 812
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+P GA PPPP
Sbjct: 794 PPPPPPLPPI--SSGAPPPPP 812
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 711 GGGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G G P PPPP IP G PPPP
Sbjct: 766 GVGVPPP-PPPPSAIPLPPRLQGGIPPPP 793
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+P PPPP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPP 516
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 711 GGGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G G P PPPP IP G PPPP
Sbjct: 766 GVGVPPP-PPPPSAIPLPPRLQGGIPPPP 793
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 40 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 94
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 40 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 94
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG*P 716
GGGG G G G GGGG G P
Sbjct: 482 GGGGGGGFGGGGGGFGGGGGGFGSGSP 508
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P P PPPP
Sbjct: 132 PPPPPPPPHYPPPPPHYPPPP 152
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +3
Query: 711 GGGXPXXXPP-PPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXP 851
GG PP PP P P P PPPP + P P P
Sbjct: 20 GGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 18 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 72
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 18 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 72
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 40 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 94
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 40 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 94
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPP-PXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXP 899
P P P P P P P P K K P P P + P + + P P
Sbjct: 40 PEPEPEPEPEPEPEPEPEPEPEPKPKPEVEPVPQPEPEPEYQPEPEPEPEVEPEP 94
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 738 PPPXPIPXXXPHXGAXPPPP 797
PPP PIP P PPPP
Sbjct: 153 PPPTPIPTPVPILEPPPPPP 172
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+ P PPPP
Sbjct: 201 PPPPVPLTSNIPQAPPAPPPP 221
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXP--HXGAXPPPPXXKKKXXXXPXXTPXXXP 851
P P PP PI P GA PPPP P P P
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+ P PPPP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPP 207
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXP--HXGAXPPPPXXKKKXXXXPXXTPXXXP 851
P P PP PI P GA PPPP P P P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P+ P PPPP
Sbjct: 187 PPPPVPLTSNIPQAPPAPPPP 207
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXP--HXGAXPPPPXXKKKXXXXPXXTPXXXP 851
P P PP PI P GA PPPP P P P
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPPXXKKKXXXXPXXTP 839
P PP P PIP P PPP + P P
Sbjct: 252 PPPPPPCPMPIPCPPPPPACSCPPPVTMYQPCMVPQYVP 290
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPP 797
P PPPP P P P PPPP
Sbjct: 248 PVCMPPPPPPCPMPIP---CPPPPP 269
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 705 GXGGGXPXXXPPPPXPIPXXXPHXGAXPPPP 797
G GG P P P+P P PPPP
Sbjct: 802 GAPGGPRPPYPYPGGPVPPGPPQNRMPPPPP 832
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +3
Query: 735 PPPPXP-IPXXXPHXGAXPPPPXXKKKXXXXPXXTPXXXPLFFXXPXXKKKXRPXPPXXK 911
PPP P P P G PPPP P P P+F P PP +
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPP--PPMF---QQGFNAGAPPPPFGR 762
Query: 912 GA 917
GA
Sbjct: 763 GA 764
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 520 PPXXXGGGGFFXGKXKXPPPPPXGXGXGGXXPFXP 416
PP GG G G PPPP GG PF P
Sbjct: 784 PPSFRGGRGGHGG----PPPPHFDRRGGGGPPFRP 814
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 6/36 (16%)
Frame = -1
Query: 518 PPXXGGGGXFFXEXKXPPPPPP------XXRXGGGG 429
PP G G PPPPPP R GGGG
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGGGG 555
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 735 PPPPXPIPXXXPHXGAXPPPP 797
PPPP P P + PPPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPP 59
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG 722
GGGG P G G GGGG G
Sbjct: 339 GGGGGIPGQSVYMGAGGGGGGGGGG 363
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 723 PXXXPPPPXPIPXXXPHXGAXPPPP 797
P PPPP P P PPPP
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPP 76
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG*P-PPXP 704
G GG G G G GGGG G P PP P
Sbjct: 617 GPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -2
Query: 796 GGGGXAPXWGXXXGIGXGGGGXXXG*P-PPXP 704
G GG G G G GGGG G P PP P
Sbjct: 617 GPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKP 648
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -2
Query: 505 GGGGFFXGKXKXPPPPPX--GXGXGG 434
GGGG G PPPPP G G GG
Sbjct: 34 GGGGGGGGCCAPPPPPPVCGGCGCGG 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,500,462
Number of Sequences: 27780
Number of extensions: 276209
Number of successful extensions: 4262
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3028
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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