Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_F21
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 135 4e-32
AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical ... 105 5e-23
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 0.89
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 2.7
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 2.7
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 29 3.6
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 29 6.3
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 8.3
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 135 bits (327), Expect = 4e-32
Identities = 76/194 (39%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Frame = +1
Query: 187 LPMSAAWKLWSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEWLSGDKSTHLCTARPTWQT 366
LP+S + RN +V +NSAP H KVK +Q Q+KEW + + L ARP W T
Sbjct: 35 LPLSFLFNTVFDFRNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLT 94
Query: 367 MSFRHSMYKRTFTNIQIN-LVDVLEVDKENMTVRCEPLVTMGQLSRTXXXXXXXXXXXXX 543
MSFR +YK T I + L D+L++D E MTV+ EP VTMGQLS+
Sbjct: 95 MSFRFPLYKENATKIATDKLFDILDLDVEKMTVKAEPGVTMGQLSQYLISRGYTLPVLPE 154
Query: 544 XDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELVLADGSVVN-----CSKDENA----D 696
D L S +G+FQH+C YE+V++DG + N +K E A
Sbjct: 155 LDDLTVGGLINGCGVESGSFKYGMFQHICTGYEVVMSDGELKNVYPDSAAKTEQAKQDNS 214
Query: 697 LFYAVPWSYGTLGF 738
LF+A+PWS GT+ F
Sbjct: 215 LFFAIPWSQGTICF 228
>AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical
protein Y7A5A.1 protein.
Length = 538
Score = 105 bits (252), Expect = 5e-23
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Frame = +1
Query: 187 LPMSAAWKLWSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEW--LSGDKSTHLCTARPTW 360
LP S + L+ R ++ K+ SA H +V+++Q Q+ EW L + LCTARP W
Sbjct: 27 LPASFLFDLFIQFRIWLDRKL-SATTSHQQRVQKIQDQVTEWSKLPDSEQKPLCTARPNW 85
Query: 361 QTMSFRHSMYKRTFTNIQINLVDVLEVDKENMTVRCEPLVTMGQLSRTXXXXXXXXXXXX 540
++S KR + I+L DVL +D++N+TV EP +T+ ++ +
Sbjct: 86 LSLSTTF-FDKRKCHQVPIDLHDVLSLDEKNLTVTVEPNITVREICKFLIPKGYTLAVTL 144
Query: 541 XXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELVLADGSVVNCS-KDENADLFYAVPW 717
SH GL+Q + YE+V ADG+V+ + +E++DLFY +PW
Sbjct: 145 EIGDATLGGLAFGVGMTTYSHKVGLYQEAIVSYEVVTADGNVITVTDSNEHSDLFYCLPW 204
Query: 718 SYGTLGF 738
S+GTLGF
Sbjct: 205 SHGTLGF 211
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.67
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = -1
Query: 668 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS* 489
TT+P+ T++ + T + T +TP T PT + + S TT + + +
Sbjct: 259 TTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Query: 488 PIVTRGSQRTVIFSLSTSKTSTR 420
P T + T F +T T+T+
Sbjct: 319 PTTTT-TASTTTFKTTTITTTTQ 340
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 0.89
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = -1
Query: 710 TA*NRSAFSSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTT 531
T + + SS LTTE R SS + T +P T + P+ + TVS T
Sbjct: 289 TTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRT 348
Query: 530 GSAKPSGANVRDS*PIVTRGSQRTVIFSLSTSKTSTR 420
KPS + + + S + + S+S T+++
Sbjct: 349 SEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQ 385
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 355 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 447
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 355 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 447
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 355 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 447
TW T H+MY+ F+NI + D L V K
Sbjct: 554 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 584
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = -1
Query: 686 SSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTG-SAKPSG 510
SS Q TT PS T+ T +P T +TP T + + + GTT A PS
Sbjct: 144 SSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPTTSTTTTARGTTDIPAPPSV 203
Query: 509 ANVRDS*PIVTRGSQRTVIF--SLSTSKTSTRLICMLVNVLLYMLCRKDIVCHVGR 348
+ +Q T+ F + + + +C+ +N + L +D+ + G+
Sbjct: 204 VEKWCMKKLQKNNAQFTIDFIEEAESDEGTNAELCIYLNRAGFKLRLEDLTEYCGK 259
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 214 WSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEWLSGDKS 330
W++ RNY++ + + P + DD+++ + K+W + +KS
Sbjct: 351 WALWRNYLIHRFSLDPLISDDRLR---TECKKWQTEEKS 386
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 297 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 428
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 137 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 180
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 297 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 428
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 179 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 222
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 297 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 428
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 179 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 222
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 668 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGS 525
TTEP+ TS+ ++ T P + +ST T PT + + + TT S
Sbjct: 275 TTEPTTTTSTTTQTTT-TVPTSTSTISTTSTTTTTPTTTTTTTSTTTS 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,356,362
Number of Sequences: 27780
Number of extensions: 434710
Number of successful extensions: 1111
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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