Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_F17
         (860 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_Q7S9L7 Cluster: Predicted protein; n=2; Sordariales|Rep...    36   1.3  
UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma j...    34   5.3  

>UniRef50_A5KRM5 Cluster: Putative uncharacterized protein; n=1;
           Ruminococcus torques ATCC 27756|Rep: Putative
           uncharacterized protein - Ruminococcus torques ATCC
           27756
          Length = 159

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 17/30 (56%), Positives = 17/30 (56%)
 Frame = +2

Query: 539 FFFXXPXGGGFXPPPXGXXPKKKXFFXXPP 628
           FFF    GGGF PPP    PKKK  F  PP
Sbjct: 117 FFFKKRGGGGFSPPP----PKKKKIFFPPP 142


>UniRef50_Q7S9L7 Cluster: Predicted protein; n=2; Sordariales|Rep:
           Predicted protein - Neurospora crassa
          Length = 745

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = -1

Query: 641 PPPPXGGKXKXFFFWGXPPXGGXXNPPPG 555
           PPPP G +    FF G PP G    PPPG
Sbjct: 681 PPPPRGMQPPPGFFGGGPPPGFMGPPPPG 709


>UniRef50_Q5C3I4 Cluster: SJCHGC03138 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC03138 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 156

 Score = 33.9 bits (74), Expect = 5.3
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -1

Query: 641 PPPPXGGKXKXFFFWGXPPXGGXXNPPPG 555
           PPPP GG     FF   PP GG   PP G
Sbjct: 55  PPPPFGGGGFPPFFHFFPPPGGGVAPPQG 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,015,920
Number of Sequences: 1657284
Number of extensions: 4795301
Number of successful extensions: 5739
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5250
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)