Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_F15
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC016842-1|AAH16842.1| 463|Homo sapiens LSM14A protein protein. 125 3e-28
AK027643-1|BAB55259.1| 463|Homo sapiens protein ( Homo sapiens ... 125 3e-28
AB069975-1|BAC99046.1| 463|Homo sapiens alphaSNBP(B) protein. 125 3e-28
AB069974-1|BAC99045.1| 463|Homo sapiens alphaSNBP(A) protein. 125 3e-28
AL137077-6|CAI11049.1| 296|Homo sapiens LSM14 homolog B (SCD6, ... 121 4e-27
BC057387-1|AAH57387.1| 221|Homo sapiens LSM14B protein protein. 119 1e-26
AL137077-5|CAI11048.1| 223|Homo sapiens LSM14 homolog B (SCD6, ... 119 1e-26
AL137077-4|CAI11047.1| 221|Homo sapiens LSM14 homolog B (SCD6, ... 119 1e-26
BC104483-1|AAI04484.1| 495|Homo sapiens SUV420H1 protein protein. 34 0.83
BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegati... 34 0.83
BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegati... 34 0.83
BC098121-1|AAH98121.1| 471|Homo sapiens SUV420H1 protein protein. 34 0.83
BC012933-1|AAH12933.1| 414|Homo sapiens SUV420H1 protein protein. 34 0.83
AK000046-1|BAA90905.1| 414|Homo sapiens protein ( Homo sapiens ... 34 0.83
BC019341-1|AAH19341.1| 613|Homo sapiens SEC24 related gene fami... 32 2.5
AJ131244-1|CAA10334.1| 1078|Homo sapiens Sec24A protein protein. 32 2.5
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 31 4.4
AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL162578-2|CAI40012.1| 331|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL049820-3|CAI42306.1| 331|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein. 31 5.9
AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein. 31 5.9
AK074180-1|BAB85006.1| 349|Homo sapiens FLJ00253 protein protein. 31 5.9
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 5.9
AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein. 31 5.9
AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein. 31 5.9
AF162278-1|AAF00199.1| 436|Homo sapiens Skn-1a/Epoc-1/Oct-11 PO... 31 7.7
>BC016842-1|AAH16842.1| 463|Homo sapiens LSM14A protein protein.
Length = 463
Score = 125 bits (301), Expect = 3e-28
Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Frame = +1
Query: 151 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ 330
MS G P +GSKISLISKA+IRYEG L+T+D + T+ALA VRSFGTEDR T P+ P+ +
Sbjct: 1 MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE 60
Query: 331 VYDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVV 501
V++YI+FRGSDIKD+ V S+P DPAI+Q S LG+ + Q +G + P
Sbjct: 61 VFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSS----LGSSTSSFQSMGSYG-PFG 115
Query: 502 GQTPYPQYHP 531
Y Q+ P
Sbjct: 116 RMPTYSQFSP 125
>AK027643-1|BAB55259.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ14737 fis, clone NT2RP3002273, weakly similar to
SCD6 PROTEIN. ).
Length = 463
Score = 125 bits (301), Expect = 3e-28
Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Frame = +1
Query: 151 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ 330
MS G P +GSKISLISKA+IRYEG L+T+D + T+ALA VRSFGTEDR T P+ P+ +
Sbjct: 1 MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE 60
Query: 331 VYDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVV 501
V++YI+FRGSDIKD+ V S+P DPAI+Q S LG+ + Q +G + P
Sbjct: 61 VFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSS----LGSSTSSFQSMGSYG-PFG 115
Query: 502 GQTPYPQYHP 531
Y Q+ P
Sbjct: 116 RMPTYSQFSP 125
>AB069975-1|BAC99046.1| 463|Homo sapiens alphaSNBP(B) protein.
Length = 463
Score = 125 bits (301), Expect = 3e-28
Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Frame = +1
Query: 151 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ 330
MS G P +GSKISLISKA+IRYEG L+T+D + T+ALA VRSFGTEDR T P+ P+ +
Sbjct: 1 MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE 60
Query: 331 VYDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVV 501
V++YI+FRGSDIKD+ V S+P DPAI+Q S LG+ + Q +G + P
Sbjct: 61 VFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSS----LGSSTSSFQSMGSYG-PFG 115
Query: 502 GQTPYPQYHP 531
Y Q+ P
Sbjct: 116 RMPTYSQFSP 125
>AB069974-1|BAC99045.1| 463|Homo sapiens alphaSNBP(A) protein.
Length = 463
Score = 125 bits (301), Expect = 3e-28
Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 3/130 (2%)
Frame = +1
Query: 151 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ 330
MS G P +GSKISLISKA+IRYEG L+T+D + T+ALA VRSFGTEDR T P+ P+ +
Sbjct: 1 MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE 60
Query: 331 VYDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVV 501
V++YI+FRGSDIKD+ V S+P DPAI+Q S LG+ + Q +G + P
Sbjct: 61 VFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSS----LGSSTSSFQSMGSYG-PFG 115
Query: 502 GQTPYPQYHP 531
Y Q+ P
Sbjct: 116 RMPTYSQFSP 125
>AL137077-6|CAI11049.1| 296|Homo sapiens LSM14 homolog B (SCD6, S.
cerevisiae) protein.
Length = 296
Score = 121 bits (291), Expect = 4e-27
Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
Frame = +1
Query: 154 SSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQV 333
SSG P LGSKISLISKA IRYEG L+T+D T+ALA VRSFGTEDR T P P+ ++
Sbjct: 4 SSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEI 63
Query: 334 YDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSVPPTLG 450
Y+YI+FRGSDIKDI V ++P DPAI+Q++ P G
Sbjct: 64 YEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQLNKRPDEG 105
>BC057387-1|AAH57387.1| 221|Homo sapiens LSM14B protein protein.
Length = 221
Score = 119 bits (287), Expect = 1e-26
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 154 SSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQV 333
SSG P LGSKISLISKA IRYEG L+T+D T+ALA VRSFGTEDR T P P+ ++
Sbjct: 4 SSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEI 63
Query: 334 YDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSV 435
Y+YI+FRGSDIKDI V ++P DPAI+Q S+
Sbjct: 64 YEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSL 100
>AL137077-5|CAI11048.1| 223|Homo sapiens LSM14 homolog B (SCD6, S.
cerevisiae) protein.
Length = 223
Score = 119 bits (287), Expect = 1e-26
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 154 SSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQV 333
SSG P LGSKISLISKA IRYEG L+T+D T+ALA VRSFGTEDR T P P+ ++
Sbjct: 4 SSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEI 63
Query: 334 YDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSV 435
Y+YI+FRGSDIKDI V ++P DPAI+Q S+
Sbjct: 64 YEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSL 100
>AL137077-4|CAI11047.1| 221|Homo sapiens LSM14 homolog B (SCD6, S.
cerevisiae) protein.
Length = 221
Score = 119 bits (287), Expect = 1e-26
Identities = 59/97 (60%), Positives = 71/97 (73%), Gaps = 3/97 (3%)
Frame = +1
Query: 154 SSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQV 333
SSG P LGSKISLISKA IRYEG L+T+D T+ALA VRSFGTEDR T P P+ ++
Sbjct: 4 SSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEDRPTDRPAPPREEI 63
Query: 334 YDYILFRGSDIKDIRVLNNVP---SMPNDPAIMQMSV 435
Y+YI+FRGSDIKDI V ++P DPAI+Q S+
Sbjct: 64 YEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSL 100
>BC104483-1|AAI04484.1| 495|Homo sapiens SUV420H1 protein protein.
Length = 495
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 236 TVKSRPS*RMSAFDIRLILEPNSGIPELIM 147
T KS+ R++ +D +LILE NSGIP+L +
Sbjct: 301 TAKSKKKRRITRYDAQLILENNSGIPKLTL 330
>BC103498-1|AAI03499.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1, isoform 1 protein.
Length = 885
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 236 TVKSRPS*RMSAFDIRLILEPNSGIPELIM 147
T KS+ R++ +D +LILE NSGIP+L +
Sbjct: 691 TAKSKKKRRITRYDAQLILENNSGIPKLTL 720
>BC099714-1|AAH99714.1| 885|Homo sapiens suppressor of variegation
4-20 homolog 1 (Drosophila) protein.
Length = 885
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 236 TVKSRPS*RMSAFDIRLILEPNSGIPELIM 147
T KS+ R++ +D +LILE NSGIP+L +
Sbjct: 691 TAKSKKKRRITRYDAQLILENNSGIPKLTL 720
>BC098121-1|AAH98121.1| 471|Homo sapiens SUV420H1 protein protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 236 TVKSRPS*RMSAFDIRLILEPNSGIPELIM 147
T KS+ R++ +D +LILE NSGIP+L +
Sbjct: 277 TAKSKKKRRITRYDAQLILENNSGIPKLTL 306
>BC012933-1|AAH12933.1| 414|Homo sapiens SUV420H1 protein protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 236 TVKSRPS*RMSAFDIRLILEPNSGIPELIM 147
T KS+ R++ +D +LILE NSGIP+L +
Sbjct: 220 TAKSKKKRRITRYDAQLILENNSGIPKLTL 249
>AK000046-1|BAA90905.1| 414|Homo sapiens protein ( Homo sapiens
cDNA FLJ20039 fis, clone COL00364. ).
Length = 414
Score = 33.9 bits (74), Expect = 0.83
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 236 TVKSRPS*RMSAFDIRLILEPNSGIPELIM 147
T KS+ R++ +D +LILE NSGIP+L +
Sbjct: 220 TAKSKKKRRITRYDAQLILENNSGIPKLTL 249
>BC019341-1|AAH19341.1| 613|Homo sapiens SEC24 related gene family,
member A (S. cerevisiae) protein.
Length = 613
Score = 32.3 bits (70), Expect = 2.5
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +1
Query: 406 NDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLN--KTS 579
N P + V P+L +GPAP + +P P + P A P ++ Q N T+
Sbjct: 87 NRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTA 146
Query: 580 SMLDLIGGGSQQNASRSGTPAVGVHRKSPTADQSIQ 687
S + S Q T H+ + S+Q
Sbjct: 147 SQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQ 182
>AJ131244-1|CAA10334.1| 1078|Homo sapiens Sec24A protein protein.
Length = 1078
Score = 32.3 bits (70), Expect = 2.5
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +1
Query: 406 NDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLN--KTS 579
N P + V P+L +GPAP + +P P + P A P ++ Q N T+
Sbjct: 72 NRPPVASNPVTPSLHSGPAPRMPLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTA 131
Query: 580 SMLDLIGGGSQQNASRSGTPAVGVHRKSPTADQSIQ 687
S + S Q T H+ + S+Q
Sbjct: 132 SQTNHCPRASSQPTVSGNTSLTTNHQYVSSGYPSLQ 167
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 376 RVLNNVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHP 531
+ L+ V P PA + +P L P PG +G + P + TP+P HP
Sbjct: 1064 KTLSEVDYAPAGPAASAL-LPGPLELQPPPGTALGLWPAPQLPSTPHPGEHP 1114
>AL591545-3|CAI40666.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 349 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 407
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 408 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 436
>AL591545-2|CAI40664.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 45 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 103
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 104 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 132
>AL591545-1|CAI40663.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 267 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 325
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 326 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 354
>AL355297-2|CAH71534.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 349 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 407
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 408 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 436
>AL162578-3|CAI40014.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 349 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 407
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 408 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 436
>AL162578-2|CAI40012.1| 331|Homo sapiens RP11-419L10.1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 214 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 272
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 273 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 301
>AL162578-1|CAI40011.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 267 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 325
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 326 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 354
>AL049820-4|CAI42308.1| 1736|Homo sapiens RP11-419L10.1 protein.
Length = 1736
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 349 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 407
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 408 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 436
>AL049820-3|CAI42306.1| 331|Homo sapiens RP11-419L10.1 protein.
Length = 331
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 214 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 272
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 273 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 301
>AL049820-2|CAI42305.1| 1485|Homo sapiens RP11-419L10.1 protein.
Length = 1485
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 45 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 103
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 104 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 132
>AL049820-1|CAI42304.1| 724|Homo sapiens RP11-419L10.1 protein.
Length = 724
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 267 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 325
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 326 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 354
>AK074180-1|BAB85006.1| 349|Homo sapiens FLJ00253 protein protein.
Length = 349
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 232 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 290
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 291 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 319
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA2 protein.
Length = 2165
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 778 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 836
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 837 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 865
>AF259792-1|AAG36928.1| 1486|Homo sapiens p250R protein.
Length = 1486
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 99 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 157
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 158 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 186
>AB033061-1|BAA86549.1| 1485|Homo sapiens KIAA1235 protein protein.
Length = 1485
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 433 VPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYH--PMAGFPS-GVHNQL--NKTSSMLDLI 597
VP +GP PG + N+ + GQ P P+ PS G+ N+ SSM
Sbjct: 45 VPSASYSGPGPGMGISA-NNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSS 103
Query: 598 GGGSQQNASRSGTPAVGVHRKSPTADQSI 684
G SQQ G P V+RK+ A ++
Sbjct: 104 PGMSQQGGPGMGPPMPTVNRKAQEAAAAV 132
>AF162278-1|AAF00199.1| 436|Homo sapiens Skn-1a/Epoc-1/Oct-11 POU
transcription factor protein.
Length = 436
Score = 30.7 bits (66), Expect = 7.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 481 QFNHPVVGQTPYPQYHPMAGFPSGVHNQLNKT---SSMLDLIGGG-SQQNASRSGTPAVG 648
+ N PV P Y+ PSG L+ S+M + S N SR +P G
Sbjct: 338 RINCPVATPIKPPDYNSRLVSPSGSLGPLSVPPVHSTMPGTVTSSCSPGNNSRPSSPGSG 397
Query: 649 VHRKSPTADQS 681
+H SPTA Q+
Sbjct: 398 LHASSPTASQN 408
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.315 0.131 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,135,786
Number of Sequences: 237096
Number of extensions: 2955368
Number of successful extensions: 4975
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 4576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4947
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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