Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_F11
         (921 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    43   4e-04
Z71181-5|CAA94898.1|  355|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z68012-2|CAA92020.1|  408|Caenorhabditis elegans Hypothetical pr...    29   6.2  
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 1/131 (0%)
 Frame = +2

Query: 416 HIKIMGVKYHYVETGPKSGQMILILCDAPETTDLWAPNWSSMVQTLTDHGYHIITLDXXX 595
           +IK+  V+ HYV+TG     ++L +   PE    W  +W   ++   D  Y  + +D   
Sbjct: 121 YIKLKKVRLHYVQTGSDDKPLMLFIHGYPE---FWY-SWRFQLKEFADK-YRCVAIDQRG 175

Query: 596 XXXXXXXXXXXXXP-PRAVEELSNLMEALGASPKKPAIVIGFGIGGMLTWYLAHCYGPMV 772
                               ++ +++E LG      AIV+    GG++ W  A  Y  MV
Sbjct: 176 YNLSDKPKHVDNYSIDELTGDIRDVIEGLGYDK---AIVVAHDWGGLVAWQFAEQYPEMV 232

Query: 773 SKFAVIEAPHP 805
            K      P P
Sbjct: 233 DKLICCNIPRP 243


>Z71181-5|CAA94898.1|  355|Caenorhabditis elegans Hypothetical
           protein K07C5.5 protein.
          Length = 355

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
 Frame = +2

Query: 410 HCHIKIMGVKYHYVETGPKSGQMILILCDAPETTDLWAPNWSSMVQTLTDHGYHIITLDX 589
           H  +++  ++ HYVE GP  G ++L++   PE    W  +W   ++    H +  I +D 
Sbjct: 56  HKFVQLKNIRMHYVEEGPADGDVLLMVHGFPE---FWY-SWRFQLEHF-KHTHRCIAIDM 110

Query: 590 XXXXXXXXXXXXXXXP-PRAVEELSNLMEALGASPKKPAIVIGFGIGGMLTWYLAHCYGP 766
                               VE++   +E L     K   +     G ++ W +A  +  
Sbjct: 111 RGYNTTDRPSGISDYNLTHLVEDIRQFIEIL---ELKRVTLAAHDWGAIVCWRVAMLHSN 167

Query: 767 MVSKFAVIEAPHP 805
           ++ +  +   PHP
Sbjct: 168 LIDRLVICNVPHP 180


>Z72515-3|CAA96683.2|  330|Caenorhabditis elegans Hypothetical
           protein T11A5.3 protein.
          Length = 330

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 228 FALIFHEVYFIYMNLHNNHVEPYNKLKGLRYNVMYGSYNAFLSIFI 91
           F +I++ +Y + M  H N +EPY     L  N+ + SY A +SI I
Sbjct: 251 FIVIYNIIYIVLM-FHANDLEPYQYFGILELNLAFPSY-AIVSIII 294


>Z68012-2|CAA92020.1|  408|Caenorhabditis elegans Hypothetical
           protein T24D5.2 protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 408 VPTLASTDISTGGKFFDNFLR*PFHKFLTRIFKICHIPRNKHFSTNSTV 262
           V T +ST+ S+  K  + FL+ P  + L + F+ CH  +N  +    T+
Sbjct: 91  VDTTSSTEESSS-KAMNQFLKGPDGEVLAKYFQFCHELKNTTYKNKYTI 138


>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
            T01C4.1 protein.
          Length = 1484

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 664  SDGSFRGVSEEACHCDWLWNWRDAN 738
            S+G + G+ +E C CD   N+R  N
Sbjct: 1459 SNGGYCGIGDEYCKCDGCVNYRTTN 1483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,784,171
Number of Sequences: 27780
Number of extensions: 448063
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)