Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_F09
         (1035 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.54 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.54 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.95 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.95 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   3.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 16/57 (28%), Positives = 16/57 (28%)
 Frame = +2

Query: 485 PXXXXXGPXSQAXPXEXXSRPPXXXSEGXXGGPPXPPXXVPXPPXPKXPPXXTTPPP 655
           P      P   A P    S P         G  P  P   P PP     P   TP P
Sbjct: 198 PGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGP 254


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 16/57 (28%), Positives = 16/57 (28%)
 Frame = +2

Query: 485 PXXXXXGPXSQAXPXEXXSRPPXXXSEGXXGGPPXPPXXVPXPPXPKXPPXXTTPPP 655
           P      P   A P    S P         G  P  P   P PP     P   TP P
Sbjct: 90  PGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGP 146


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +2

Query: 641 TTPPPPPXPXXXQPXPXXXPXXTXPP 718
           T+ PPPP     QP P   P     P
Sbjct: 327 TSSPPPPYQISAQPTPSQSPNQIYQP 352


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = +3

Query: 633 PXXXPPPPPQXXXGASPXPXXXPXPRSP 716
           P     P P     ASP P   P P SP
Sbjct: 39  PNSAASPAPPEEEAASPTPGDVPTPSSP 66


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = +1

Query: 583 PXPPLXGTXSAXPQXXPPXNXPPPPPKXXXXPAPPXXXPRXHXP 714
           P P +     A P      N  PP P+    P PP   P    P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPTMINP 196


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 601  GTXSAXPQXXPPXNXPPPPPKXXXXPAPPXXXPR 702
            G+ +  P+  P    PP PP     P P    P+
Sbjct: 1361 GSTTNYPEWQPTEWHPPIPPTSEKPPLPEELKPQ 1394


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/30 (33%), Positives = 10/30 (33%)
 Frame = +2

Query: 611 PPXPKXPPXXTTPPPPPXPXXXQPXPXXXP 700
           PP        T PPPPP        P   P
Sbjct: 202 PPTEDCDVPSTIPPPPPEEDDDSNIPQNNP 231



 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 634 PXNXPPPPPKXXXXPAPPXXXPR 702
           P   PPPPP+       P   P+
Sbjct: 210 PSTIPPPPPEEDDDSNIPQNNPK 232


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +2

Query: 614 PXPKXPPXXTTPPPPPXPXXXQPXP 688
           P P   P   TP PP  P      P
Sbjct: 409 PIPNVSPHYVTPTPPEAPLFQNVLP 433


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/28 (35%), Positives = 11/28 (39%)
 Frame = +1

Query: 634 PXNXPPPPPKXXXXPAPPXXXPRXHXPP 717
           P + PPPPP      A     P    PP
Sbjct: 159 PLHYPPPPPVYTHHYARYHPYPNFGVPP 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,739
Number of Sequences: 336
Number of extensions: 2304
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29485742
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)