Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_F01
         (941 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.47 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.62 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
 Frame = +1

Query: 565 KXXXXGXGGGGXXXPPPGGGXXS---PXXGGG 651
           K    G GGGG     PGGG  S   P  GGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 326 PPXGGGGXKXXFLGKXXGXRGGGGPXXXG 412
           P  GGGG      G   G  GG GP   G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
 Frame = -2

Query: 937  APPPPPXGXXGP-TLSPLNTQXGVXXGGXGGXFXGENGR 824
            APP PP       T  P  +       G GG    ENG+
Sbjct: 1213 APPAPPTSKRDRRTSGPAVSDAATEGAGGGGAAGAENGK 1251


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
 Frame = -1

Query: 656 GDPPPXXGXXXPPPGGGXXXPPP---PXPXXXXFXLGXXXXXXXXXXXXXXXXXXXFXPX 486
           G PPP      PPPGG     PP   P P                             P 
Sbjct: 529 GPPPP------PPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPP 582

Query: 485 KXPPPPPPXXKXKKKXXGG 429
             PPPPPP         GG
Sbjct: 583 PAPPPPPPMGPPPSPLAGG 601



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 393 PPPRXPXXXPKKXXFXPPPPXGGGP 319
           PPP  P   P      PP P  GGP
Sbjct: 581 PPPAPPPPPPMGP---PPSPLAGGP 602



 Score = 23.4 bits (48), Expect(2) = 0.62
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -1

Query: 650 PPPXXGXXXPPPGGGXXXPPPPXP 579
           PP   G       GG   PPPP P
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPP 535



 Score = 22.2 bits (45), Expect(2) = 0.62
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 491 PXKXPPPPPP 462
           P   PPPPPP
Sbjct: 527 PLGPPPPPPP 536


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 869 YPGLGI*RGKXGAXXSXGGGGGG 937
           Y G G  RG  G+    GGGGGG
Sbjct: 547 YEGAG--RGGVGSGIGGGGGGGG 567



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 570 SGXXXGGGGXGXXPPGGG 623
           SG   GGGG G    GGG
Sbjct: 557 SGIGGGGGGGGGGRAGGG 574


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 580 GXGGGGXXXPPPGGGXXSPXXGGGSPR 660
           G GGGG      G G  S   GGGS R
Sbjct: 658 GGGGGGGSVGSGGIGSSSLGGGGGSGR 684



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 580 GXGGGGXXXPPPGGGXXSPXXGGG 651
           G GGGG       GG  S   GGG
Sbjct: 656 GGGGGGGGGSVGSGGIGSSSLGGG 679


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,658
Number of Sequences: 2352
Number of extensions: 10088
Number of successful extensions: 116
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)