Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_E16
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023830-3|CAE17985.1|  204|Caenorhabditis elegans Hypothetical ...    92   6e-19
AL032620-1|CAA21487.1|  354|Caenorhabditis elegans Hypothetical ...    33   0.37 
Z72508-8|CAA96640.2|  366|Caenorhabditis elegans Hypothetical pr...    31   1.5  
U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical p...    28   7.9  

>AL023830-3|CAE17985.1|  204|Caenorhabditis elegans Hypothetical
           protein Y26E6A.3 protein.
          Length = 204

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 7/168 (4%)
 Frame = +1

Query: 313 PAATRNQEPILQVLKRFVTYDCAEDDSPLFLEVASGSGQHLAHFAPHFPNIKFQPTEFDE 492
           PAA  N++ IL+VL+RF T            E+ASG+GQH+ HFA   P++ FQPTE + 
Sbjct: 5   PAAESNKDVILEVLRRFAT------SGKKVFELASGTGQHMEHFARALPDVTFQPTEVNG 58

Query: 493 TLLGSIKYYATECPTKNILLPIQLDICTDLVHYG----FLEESIDYVYNANMIHISPYEC 660
             L SI  Y  +    N+ +P+ +D+      +     F    +D V N NMIHI     
Sbjct: 59  RYLHSIVSYLDQSQFPNVRIPLFIDVAKPFNQWALPADFGPHMVDIVLNINMIHICSTAA 118

Query: 661 TIGLFKNAGCYL-KPNALMILYGPLVRWSN-TPDSNVQLML-FKAXNP 795
             GLF++A   L + N +++ YGP     + +P SN+      KA +P
Sbjct: 119 VKGLFQSADLLLHETNGILMTYGPYAEDGHISPQSNIAFHTNLKAEDP 166


>AL032620-1|CAA21487.1|  354|Caenorhabditis elegans Hypothetical
           protein Y36E3A.1 protein.
          Length = 354

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +1

Query: 199 FKNLNYY--KFLNNWSMSKLKDFSCAFHGNENMANQKLIYP 315
           F NL  Y  K L N  + KL+DF+  F+ N+N+  Q L +P
Sbjct: 142 FTNLAIYDLKLLMNMHLLKLQDFTLGFYPNDNVDLQSLHFP 182


>Z72508-8|CAA96640.2|  366|Caenorhabditis elegans Hypothetical
           protein F28H7.9 protein.
          Length = 366

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 446 HLIFQI*NFSQQNLTKPF*EALNIMQRNVQPKIY 547
           HLIF + N  Q +L   F E +N   +N++ K+Y
Sbjct: 299 HLIFLLSNTDQLDLRTTFGEEMNYSDKNIESKVY 332


>U55364-3|AAN84821.1|  349|Caenorhabditis elegans Hypothetical
           protein F21C10.12 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = -2

Query: 700 VLDSSLHF*ISRLYIHKDLYESYLHYRHNLYFLLKIH-NELNLYIYPIVLVRVYFWLDIP 524
           +L    HF    L + + +++ +L+ RHN YF + I  + + + I+      +Y++    
Sbjct: 242 ILFGFCHFFSMALKLFESIFKDFLN-RHNEYFEVMIEVSNILIVIHIGTTFFIYYFFSAR 300

Query: 523 LHNI*CFL 500
             NI C+L
Sbjct: 301 FRNILCYL 308


>Z50875-2|CAA90777.1| 1322|Caenorhabditis elegans Hypothetical
           protein T08A11.2 protein.
          Length = 1322

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 806 SNPSGFXALKSINWTLLSGVLLHLTKGPYKIIKALGF 696
           S+P G  A  S+   L  G+ +H  KG    +KA+G+
Sbjct: 734 SSPYGIEAFDSVLKPLWKGIRMHRGKGLAAFLKAIGY 770


>Z50874-13|CAA90775.1| 1322|Caenorhabditis elegans Hypothetical
           protein T08A11.2 protein.
          Length = 1322

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 806 SNPSGFXALKSINWTLLSGVLLHLTKGPYKIIKALGF 696
           S+P G  A  S+   L  G+ +H  KG    +KA+G+
Sbjct: 734 SSPYGIEAFDSVLKPLWKGIRMHRGKGLAAFLKAIGY 770


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,650,253
Number of Sequences: 27780
Number of extensions: 369905
Number of successful extensions: 831
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)