Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_E12
         (948 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07882-1|CAA30729.1|  226|Homo sapiens Po protein protein.             31   8.1  
X07704-1|CAA30542.1|  234|Homo sapiens Po protein protein.             31   8.1  
S80916-1|AAB50687.2|  238|Homo sapiens parotid 'o' protein protein.    31   8.1  
BC130386-1|AAI30387.1|  268|Homo sapiens PRB4 protein protein.         31   8.1  

>X07882-1|CAA30729.1|  226|Homo sapiens Po protein protein.
          Length = 226

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 463 SRSPPXXPXAPGLXXGXXVX-PPPXGXXXXSPDXGGSPGKXFLP 591
           +RSPP  P  P    G     PPP G     P  GG+P +   P
Sbjct: 155 ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAP 198


>X07704-1|CAA30542.1|  234|Homo sapiens Po protein protein.
          Length = 234

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 463 SRSPPXXPXAPGLXXGXXVX-PPPXGXXXXSPDXGGSPGKXFLP 591
           +RSPP  P  P    G     PPP G     P  GG+P +   P
Sbjct: 163 ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAP 206


>S80916-1|AAB50687.2|  238|Homo sapiens parotid 'o' protein protein.
          Length = 238

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 463 SRSPPXXPXAPGLXXGXXVX-PPPXGXXXXSPDXGGSPGKXFLP 591
           +RSPP  P  P    G     PPP G     P  GG+P +   P
Sbjct: 167 ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAP 210


>BC130386-1|AAI30387.1|  268|Homo sapiens PRB4 protein protein.
          Length = 268

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 463 SRSPPXXPXAPGLXXGXXVX-PPPXGXXXXSPDXGGSPGKXFLP 591
           +RSPP  P  P    G     PPP G     P  GG+P +   P
Sbjct: 197 ARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQPQAP 240


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,085,884
Number of Sequences: 237096
Number of extensions: 1511269
Number of successful extensions: 3185
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)