Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_E07
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.0  
12_02_0640 - 21447470-21448309                                         28   9.4  
12_02_0635 - 21430245-21431156                                         28   9.4  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
 Frame = -2

Query: 692 PPFXFWGXGXPXKKKKILPXXPPXGGXKXXNPPXXGXXXPPXPXKPR--XPPXLGXKKXG 519
           PP        P    K  P  PP  G     PP  G   PP P  P    PP  G KK G
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPP-PPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376



 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = -1

Query: 660 PXKKKNFARXPPPXGXKXKXPPXXGGXXPPXPXXTPXXP 544
           P K    A  PPP       PP   G  PP P   P  P
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPP 356


>12_02_0640 - 21447470-21448309
          Length = 279

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 639 ARXPPPXGXKXKXPPXXGGXXPPXPXXTPXXP 544
           AR PPP   +   PP      PP P  +P  P
Sbjct: 209 ARTPPPERRESPSPPRGRPRTPPPPPGSPKKP 240


>12_02_0635 - 21430245-21431156
          Length = 303

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -1

Query: 639 ARXPPPXGXKXKXPPXXGGXXPPXPXXTPXXP 544
           AR PPP   +   PP      PP P  +P  P
Sbjct: 206 ARTPPPERRESPSPPRGRPRTPPPPPGSPKKP 237


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,230,217
Number of Sequences: 37544
Number of extensions: 209917
Number of successful extensions: 582
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)