Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_E06
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical pr...   136   3e-32
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z74032-5|CAA98467.1|  219|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical
           protein C54G4.8 protein.
          Length = 285

 Score =  136 bits (328), Expect = 3e-32
 Identities = 63/107 (58%), Positives = 80/107 (74%)
 Frame = +3

Query: 189 LLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFR 368
           L++ALE SV ASG   HP   PW HSG FSS D ASVRRGYEVYKQVC ACHS++++ +R
Sbjct: 27  LVYALENSVSASGDNVHPYALPWAHSGPFSSFDIASVRRGYEVYKQVCAACHSMKFLHYR 86

Query: 369 NLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSPYP 509
           + V+   TE+EAKAEAA+ +I D  D++G   +RPG L+D LP+PYP
Sbjct: 87  HFVDTIMTEEEAKAEAADALIND-VDDKGASIQRPGMLTDKLPNPYP 132


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 205 SSAKSRAPTPPPTTPKVDS 149
           SS++SR+P PPP  P+ DS
Sbjct: 508 SSSRSRSPPPPPRRPRQDS 526


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 185 SNTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHI 72
           S T  + S+S    F     +++ WW  DKPE  LD I
Sbjct: 11  SETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWI 48


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 185 SNTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHI 72
           S T  + S+S    F     +++ WW  DKPE  LD I
Sbjct: 11  SETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWI 48


>U46753-6|AAO21474.1|  740|Caenorhabditis elegans Hypothetical
           protein C34F11.3a protein.
          Length = 740

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +3

Query: 204 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 383
           E +VQ S +   PP + W  +      +     R      ++C    S+    F+N VNV
Sbjct: 170 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 227

Query: 384 THTEDEAKAEAAEVMIKDGP 443
           T  E     E    MI DGP
Sbjct: 228 TKEEFLNDTEKLTAMIVDGP 247


>U46753-5|ABB88235.1|  803|Caenorhabditis elegans Hypothetical
           protein C34F11.3c protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +3

Query: 204 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 383
           E +VQ S +   PP + W  +      +     R      ++C    S+    F+N VNV
Sbjct: 233 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 290

Query: 384 THTEDEAKAEAAEVMIKDGP 443
           T  E     E    MI DGP
Sbjct: 291 TKEEFLNDTEKLTAMIVDGP 310


>U46753-4|AAO21475.1|  764|Caenorhabditis elegans Hypothetical
           protein C34F11.3b protein.
          Length = 764

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +3

Query: 204 EQSVQASGSEAHPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAFRNLVNV 383
           E +VQ S +   PP + W  +      +     R      ++C    S+    F+N VNV
Sbjct: 194 ETTVQTSFNPPDPPKDHWGKNDPLPKYEKIYHLRRNRGVTEICNDDGSIDQ-QFKN-VNV 251

Query: 384 THTEDEAKAEAAEVMIKDGP 443
           T  E     E    MI DGP
Sbjct: 252 TKEEFLNDTEKLTAMIVDGP 271


>Z74032-5|CAA98467.1|  219|Caenorhabditis elegans Hypothetical
           protein F35B12.6 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 226 PDACTDCSSAKSRAPTPPPTTPKVDSH 146
           PD  +D S+ +S +P  PP  P+ D H
Sbjct: 84  PDTISDDSADQSGSPNSPPFVPQGDGH 110


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,660,233
Number of Sequences: 27780
Number of extensions: 242017
Number of successful extensions: 909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)