Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_E04
         (926 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.35 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.61 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   7.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -2

Query: 397 PPPPPPXXXPRGGXXXXPPHXXPP 326
           PPPPPP   P G     PP   PP
Sbjct: 530 PPPPPP---PGGAVLNIPPQFLPP 550



 Score = 27.1 bits (57), Expect = 0.81
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = +3

Query: 468 PPNAPPPPXPXXXXXGGXXGXGPXXGXXXXGPGXAPPXXXXGAPP 602
           PP APPPP P         G GP  G     P         GA P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAG-GPLGGPAGSRPPLPNLLGFGGAAP 624



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
 Frame = +3

Query: 471 PNAPPPPXPXXXXXGGXXGXGPXXGXXXXGP-GXAPP 578
           PNA PPP P      G     P  G    GP G  PP
Sbjct: 577 PNAQPPPAPPPPPPMGPP-PSPLAGGPLGGPAGSRPP 612



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 4/36 (11%)
 Frame = -2

Query: 421 PXVXXXXXPPPPPPXXXP----RGGXXXXPPHXXPP 326
           P       PPPPPP   P     GG    P    PP
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +3

Query: 468 PPNAPPPPXPXXXXXGGXXGXGPXXGXXXXGPGXAPP 578
           PP  PPP        GG  G  P         G APP
Sbjct: 589 PPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -2

Query: 574 GAXPGPXXXXPXXGPXPXXPPXXXXXGXGG 485
           G  P P    P  GP    PP     G GG
Sbjct: 592 GPPPSPLAGGPLGGPAGSRPPLPNLLGFGG 621


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.61
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 336  QWGGXXXXPPRGXXXGGGGGG 398
            Q GG    P +G   GGGGGG
Sbjct: 1482 QQGGYGGSPTKGAGGGGGGGG 1502


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +3

Query: 342 GGXXXXPPRGXXXGGGGGG 398
           GG    P  G   GGGGGG
Sbjct: 112 GGYLANPYYGATAGGGGGG 130



 Score = 23.4 bits (48), Expect = 9.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 397 PPPPPPXXXPRGG 359
           PPPPPP     GG
Sbjct: 786 PPPPPPSSLSPGG 798



 Score = 22.2 bits (45), Expect(2) = 3.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 471 PNAPPPPXPXXXXXGG 518
           P  PPPP P     GG
Sbjct: 783 PPPPPPPPPSSLSPGG 798



 Score = 20.6 bits (41), Expect(2) = 3.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 453 GXXXXPPNAPPPP 491
           G    PP  PPPP
Sbjct: 779 GIGSPPPPPPPPP 791


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 684 GGRXXRGGXEGGXGXXR 634
           GGR  RGG  GG G  R
Sbjct: 67  GGRGGRGGRGGGRGRGR 83


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 327 GGXQWGGXXXXPPRGXXXGGGGGG 398
           GG   GG       G   GGGGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGG 232


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,615
Number of Sequences: 2352
Number of extensions: 6784
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)